Gene Dred_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0034 
Symbol 
ID4958097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp41281 
End bp41964 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID640179186 
Producttransposase, IS111A/IS1328/IS1533 
Protein accessionYP_001111409 
Protein GI134297913 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATA AACAAAAACA ACGAATTGAG CAACTCACAG AATCAACTTT AATTATTGGA 
GCAGATATTG CTAAATCAAA ACATGTGGCC CGGGCCCAGG ACTTTAGGGG TATTGAGCTG 
GGGAAACGCT TGATCTTTGA CAACACTAGG GCAGGCTTAA CTAAGCTGAT GCATTGGATT 
AGAACCTTGA TGGTAGAACA CTGTAAGGAT CATGTCCTTG TAGGTATCGA ACCCACAGGA 
TACTACTGGT TACCAATGGC TGAGTTTTTA CGCAGAGAAG GCATACCAGT GGTAGTGGTA 
AATCCCTTGC ATGTTAAGAG AAGCAAGGAA TTAGACGATA ACTCGCCCAC AAAGAATGAC 
ACCAAAGATG CAAGGGTAAT CGCCCAATTA GTAAAAGATG GCCGATACTC AGAACCCAAC 
TTACCCACAG GTGTCTACTC AGAACTACGG GTAGGAATGG CTCAGCGAGA TCGTCTGAAT 
CAAGATCTTA ACCGTGTAAA GGGTAGAATC CACAACTGGC TTGACCGTTA CTTCCCCGAG 
TACACAGGGG TATTTAAGGA TTGGGAAGGC AAAGCGTCCC TGATGATATT GAATACCTGC 
CCACTCCCCG GGAAGTCATC AAAACAGGCA CAGAAGCCAT TGTGGCCCTG TGGAAAACTG 
AGATTAAACG GGCAATGGGT GTAA
 
Protein sequence
MNYKQKQRIE QLTESTLIIG ADIAKSKHVA RAQDFRGIEL GKRLIFDNTR AGLTKLMHWI 
RTLMVEHCKD HVLVGIEPTG YYWLPMAEFL RREGIPVVVV NPLHVKRSKE LDDNSPTKND 
TKDARVIAQL VKDGRYSEPN LPTGVYSELR VGMAQRDRLN QDLNRVKGRI HNWLDRYFPE 
YTGVFKDWEG KASLMILNTC PLPGKSSKQA QKPLWPCGKL RLNGQWV