Gene Dred_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0024 
Symbol 
ID4956391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp30849 
End bp31649 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content40% 
IMG OID640179176 
ProductAAA ATPase 
Protein accessionYP_001111399 
Protein GI134297903 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGG CTTTTTATTC TCTTTCTGCC ACTCCATTCA CTAAAGATCT AAAAACCTCT 
AATTCTTTTG CATCCACTTC CTTCACAGAA GTATCCGCCC GGCTTGATTA CTTAAAGAAG
GCAAGGGGTA TGGGATTACT GGTTGGAGAG CCTGGTGCTG GCAAAACATT TTCATTAAGG
AACTTTGCTG AATCATTGAA TCCATCTTTA TACAAGGTAA TCTATTTTCC GTTATCAACA
GGGACAGTGA TGGATTTCTT TCGTGGCCTT GCCATTGGTT TAGGCGAGGA ACCCAAATTT
CGTAAGGTAG ATTTATTTCA TCAAATCCAA AGGGCTGTCT TGGTATATTT CCGAGAACGA
AAAATTACGC CAGTATTCAT CTTGGATGAG ATGCAGATGG CAAGGAATCT TTTCCTACAT
GATTTAAGCA TTCTCTTTAA TTTTGGTATG GATTCAGAAA GTCCATTTAT TTTAATACTT
GCGGGTCTGC CAAACCTGCA GAGCAAATTA ACACTAAATC ATAACCGTCC CATCTCTCAA
CGACTGATCA TGCGTTACAA AATGGAGCCT TTAAACAAAG AAGAAGTGGC AAACTATATA
CAGCATCACA TGGAATTAGC CGGGGCAAGG CATCAAATAT TTAGTGAGCC TGCTGTTTCG
GCCATTACCT CTCATTCCCG AGGATGGCCA CACCTGATAA ATAACCTAGC TACCAACTGT
TTATTATCCG GGTATCAGAT GAAAAAGGAA CTGATTGATG AGGAAGTTGT CCGAGTGGCA
GTCCAAGAAA TGTCTATGTA A
 
Protein sequence
MYKAFYSLSA TPFTKDLKTS NSFASTSFTE VSARLDYLKK ARGMGLLVGE PGAGKTFSLR 
NFAESLNPSL YKVIYFPLST GTVMDFFRGL AIGLGEEPKF RKVDLFHQIQ RAVLVYFRER
KITPVFILDE MQMARNLFLH DLSILFNFGM DSESPFILIL AGLPNLQSKL TLNHNRPISQ
RLIMRYKMEP LNKEEVANYI QHHMELAGAR HQIFSEPAVS AITSHSRGWP HLINNLATNC
LLSGYQMKKE LIDEEVVRVA VQEMSM