Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0007 |
Symbol | |
ID | 4957033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 6995 |
End bp | 9451 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640179150 |
Product | DNA gyrase, A subunit |
Protein accession | YP_001111384 |
Protein GI | 134297888 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000039295 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCCC TTACTGGTAA GGTCATTCCT TTGGATATAA ACAATGAAAT GAAGAACTCC TACTTAGATT ACGCCATGAG TGTAATTGTA GGTAGAGCTT TACCGGATGT TCGAGATGGC CTAAAACCTG TACATCGAAG AATTCTTTAC TCCCTGCATG AATTAGGATT AACACCAGAT AAGTCGTATC GAAAAAGTGC AGGTATTGTG GGTAAAGTTA TGCAAGATTT TCATCCCCAT GGCGATTCAG CTATTTATGA TGCCATGGTA CGATTAGCAC AGGATTTTGC CAGCCGTTAT CCATTGATTC AGGGTCATGG TAACTTTGGC TCCATTGATG GGGACCCGCC GGCAGCTATG CGTTACACTG AAGCCCGCAT GGCCAAGATT ACACTGGAAA TGCTGGCGGA CATTGACAAA GAAACAGTTG ATTTTGCTCC TAACTATGAC AACCGAACCG AAGAACCCAC AATCTTGCCA TCTAAAATAC CAAATTTACT CGTAAACGGT TCCTCTGGTA TTGCTGTAGG TATGGCTACC AACATACCAC CGCATAACAT GGGAGAGGTT ATTGATGGGG TCTTGATGAT GATTAAAGAT CCTAATGTAA CACCGGATGA TTTGATGAAG GTTATCAAAG GACCTGACTT TCCAACCGGA GCTACCATTA TGGGCAAAGA CGGGATACGT CAAGCCTATC GAACTGGTAG GGGCAGTGTT AAAATGCGGG CCCAGACCAC CATTGAGACA AAGGCCAATG GAAGACCGGT TATCATTGTT AACGAAATAC CCTATCAGGT GAACAAAGCA AAACTAATAG AAAAGATTGC TGAGTTAGTC AAAGATAAGA AAATTGAAGG CATTTCAGAC CTGCGTGACG AATCTGATCG CAGGGGTATG CGAATTGTTA TTGAACTAAA GAAAGACAGC AATCCTAATG TGATTTTGAA CCTTCTTTAC AAGCATACGC AAATGCAGGA AAGCTTTGGC ATTATTATGC TAGCATTGGT TAATAATGAG CCCAAAGTTT TAAACCTTGC GCAGGTGATT TTTCACTACC TTGAACATCA AAAGGATGTT ATCACCCGTA GGACAAGGTA TGAACTTAAA AAAGCTGAAG CAAGGGCCCA CATCGTTGAA GGGTTACGTA TTGCGCTGGC TAACCTAGAT GAAGTTATTA AAACAATTCG GGAATCTAAA AACACCGAAG AAGCTAGGCG AGGTTTGGTC GATAAATTTA ATCTGACCGA AATCCAAGCA GAGGCCATTG TAGAAATGCG CTTACGTAGC TTAACTGCTT TAGAAGTAGA AAAATTAGAA AAAGAATACA AAGAATTGCT GGAGAAGATT GATTACCTGC GTTCTATTTT AGCGGATGAG CAAAAGGTTT TGAATATTAT TCGGGATGAA CTATTGGTGG TTAAAGAAAA ATTTGCAGAT GCTCGACGTA CCCTCATTAG TAATGTTGCT GCCGGGGATT TTGATATTGA AGATCTTATT GATGAAGAAG ACATGGTAGT TACCATTACG AACCAGGGAT ATATTAAGAG AATCTCAATG GACACCTATA GAAGCCAAAA AAGAGGTGGT AAAGGAATTA CCGCCATGGG AACCAAAGAA GAGGATTTTG TAAGAGATCT CTTTATAGCA TCAACACACC ACTTTTTACT ATTCTTTACC AATAAAGGAA AAGTGTATAG ATTAAAAGTT TACGAAGTGC CAGAGGCATC CAGAACGGCG AAGGGTACAC CTATTATTAA TTTATTAAGT TTTGACAGTG ATGAATATGT AACAACCGTT ATCCCAATTA AAGAATTTGA AGAAACAGCC TATCTATTCA TGGCTACCAA ACATGGTATC GTGAAGAAGA CAGCCTTAAC AGAATATAAT TCCTCACGTC GGGATGGGTT AATTGCTATT AATCTGGATG AAAAGGATAA ATTAGTTGCG GTTGAACTTA CTCACGGTAA AGAGGAAATT ATAATGTGTA CCCAAGAAGG GATAGCAATT CGTTTTTCGG AAGAAGATGT AAGGCCTATG GGACGTGTTA CCAGAGGTGT TAAAGGGATC ACATTATCTC AAAATGACCA TGTAGTTAAG ATGGATGTAA TTAAGGAGGG CGCCAGTTTA CTTACTGTTA CAGCCAATGG GTATGGAAAA AGAACTCCTA TGGATGAGTA TCGAATTCAA GCCCGTGGTG GTAAGGGGAT AATAAATATT AAAACCACCA AAAGAAATGG AGCAGTAACA GGTGTACTTG TAGTAAGTGA AGAAGATGAA GTTATGATGA TTAGTGCAGA AGGTATTATC ATCCGTATTA ATGTTAAAGA TGTTTCATCT ATGGGCAGAA ATACGCAGGG AGTTACCTTA ATGAGAACAG GCGAAAATGA TCATATTGTT GCGATTGCAA AAGTAATAAC AGAAGAAAAC GAAGAGAAAA AAATTCTAGA TATCTAG
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Protein sequence | MASLTGKVIP LDINNEMKNS YLDYAMSVIV GRALPDVRDG LKPVHRRILY SLHELGLTPD KSYRKSAGIV GKVMQDFHPH GDSAIYDAMV RLAQDFASRY PLIQGHGNFG SIDGDPPAAM RYTEARMAKI TLEMLADIDK ETVDFAPNYD NRTEEPTILP SKIPNLLVNG SSGIAVGMAT NIPPHNMGEV IDGVLMMIKD PNVTPDDLMK VIKGPDFPTG ATIMGKDGIR QAYRTGRGSV KMRAQTTIET KANGRPVIIV NEIPYQVNKA KLIEKIAELV KDKKIEGISD LRDESDRRGM RIVIELKKDS NPNVILNLLY KHTQMQESFG IIMLALVNNE PKVLNLAQVI FHYLEHQKDV ITRRTRYELK KAEARAHIVE GLRIALANLD EVIKTIRESK NTEEARRGLV DKFNLTEIQA EAIVEMRLRS LTALEVEKLE KEYKELLEKI DYLRSILADE QKVLNIIRDE LLVVKEKFAD ARRTLISNVA AGDFDIEDLI DEEDMVVTIT NQGYIKRISM DTYRSQKRGG KGITAMGTKE EDFVRDLFIA STHHFLLFFT NKGKVYRLKV YEVPEASRTA KGTPIINLLS FDSDEYVTTV IPIKEFEETA YLFMATKHGI VKKTALTEYN SSRRDGLIAI NLDEKDKLVA VELTHGKEEI IMCTQEGIAI RFSEEDVRPM GRVTRGVKGI TLSQNDHVVK MDVIKEGASL LTVTANGYGK RTPMDEYRIQ ARGGKGIINI KTTKRNGAVT GVLVVSEEDE VMMISAEGII IRINVKDVSS MGRNTQGVTL MRTGENDHIV AIAKVITEEN EEKKILDI
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