Gene Dred_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0007 
Symbol 
ID4957033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp6995 
End bp9451 
Gene Length2457 bp 
Protein Length818 aa 
Translation table11 
GC content40% 
IMG OID640179150 
ProductDNA gyrase, A subunit 
Protein accessionYP_001111384 
Protein GI134297888 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000039295 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCCC TTACTGGTAA GGTCATTCCT TTGGATATAA ACAATGAAAT GAAGAACTCC 
TACTTAGATT ACGCCATGAG TGTAATTGTA GGTAGAGCTT TACCGGATGT TCGAGATGGC
CTAAAACCTG TACATCGAAG AATTCTTTAC TCCCTGCATG AATTAGGATT AACACCAGAT
AAGTCGTATC GAAAAAGTGC AGGTATTGTG GGTAAAGTTA TGCAAGATTT TCATCCCCAT
GGCGATTCAG CTATTTATGA TGCCATGGTA CGATTAGCAC AGGATTTTGC CAGCCGTTAT
CCATTGATTC AGGGTCATGG TAACTTTGGC TCCATTGATG GGGACCCGCC GGCAGCTATG
CGTTACACTG AAGCCCGCAT GGCCAAGATT ACACTGGAAA TGCTGGCGGA CATTGACAAA
GAAACAGTTG ATTTTGCTCC TAACTATGAC AACCGAACCG AAGAACCCAC AATCTTGCCA
TCTAAAATAC CAAATTTACT CGTAAACGGT TCCTCTGGTA TTGCTGTAGG TATGGCTACC
AACATACCAC CGCATAACAT GGGAGAGGTT ATTGATGGGG TCTTGATGAT GATTAAAGAT
CCTAATGTAA CACCGGATGA TTTGATGAAG GTTATCAAAG GACCTGACTT TCCAACCGGA
GCTACCATTA TGGGCAAAGA CGGGATACGT CAAGCCTATC GAACTGGTAG GGGCAGTGTT
AAAATGCGGG CCCAGACCAC CATTGAGACA AAGGCCAATG GAAGACCGGT TATCATTGTT
AACGAAATAC CCTATCAGGT GAACAAAGCA AAACTAATAG AAAAGATTGC TGAGTTAGTC
AAAGATAAGA AAATTGAAGG CATTTCAGAC CTGCGTGACG AATCTGATCG CAGGGGTATG
CGAATTGTTA TTGAACTAAA GAAAGACAGC AATCCTAATG TGATTTTGAA CCTTCTTTAC
AAGCATACGC AAATGCAGGA AAGCTTTGGC ATTATTATGC TAGCATTGGT TAATAATGAG
CCCAAAGTTT TAAACCTTGC GCAGGTGATT TTTCACTACC TTGAACATCA AAAGGATGTT
ATCACCCGTA GGACAAGGTA TGAACTTAAA AAAGCTGAAG CAAGGGCCCA CATCGTTGAA
GGGTTACGTA TTGCGCTGGC TAACCTAGAT GAAGTTATTA AAACAATTCG GGAATCTAAA
AACACCGAAG AAGCTAGGCG AGGTTTGGTC GATAAATTTA ATCTGACCGA AATCCAAGCA
GAGGCCATTG TAGAAATGCG CTTACGTAGC TTAACTGCTT TAGAAGTAGA AAAATTAGAA
AAAGAATACA AAGAATTGCT GGAGAAGATT GATTACCTGC GTTCTATTTT AGCGGATGAG
CAAAAGGTTT TGAATATTAT TCGGGATGAA CTATTGGTGG TTAAAGAAAA ATTTGCAGAT
GCTCGACGTA CCCTCATTAG TAATGTTGCT GCCGGGGATT TTGATATTGA AGATCTTATT
GATGAAGAAG ACATGGTAGT TACCATTACG AACCAGGGAT ATATTAAGAG AATCTCAATG
GACACCTATA GAAGCCAAAA AAGAGGTGGT AAAGGAATTA CCGCCATGGG AACCAAAGAA
GAGGATTTTG TAAGAGATCT CTTTATAGCA TCAACACACC ACTTTTTACT ATTCTTTACC
AATAAAGGAA AAGTGTATAG ATTAAAAGTT TACGAAGTGC CAGAGGCATC CAGAACGGCG
AAGGGTACAC CTATTATTAA TTTATTAAGT TTTGACAGTG ATGAATATGT AACAACCGTT
ATCCCAATTA AAGAATTTGA AGAAACAGCC TATCTATTCA TGGCTACCAA ACATGGTATC
GTGAAGAAGA CAGCCTTAAC AGAATATAAT TCCTCACGTC GGGATGGGTT AATTGCTATT
AATCTGGATG AAAAGGATAA ATTAGTTGCG GTTGAACTTA CTCACGGTAA AGAGGAAATT
ATAATGTGTA CCCAAGAAGG GATAGCAATT CGTTTTTCGG AAGAAGATGT AAGGCCTATG
GGACGTGTTA CCAGAGGTGT TAAAGGGATC ACATTATCTC AAAATGACCA TGTAGTTAAG
ATGGATGTAA TTAAGGAGGG CGCCAGTTTA CTTACTGTTA CAGCCAATGG GTATGGAAAA
AGAACTCCTA TGGATGAGTA TCGAATTCAA GCCCGTGGTG GTAAGGGGAT AATAAATATT
AAAACCACCA AAAGAAATGG AGCAGTAACA GGTGTACTTG TAGTAAGTGA AGAAGATGAA
GTTATGATGA TTAGTGCAGA AGGTATTATC ATCCGTATTA ATGTTAAAGA TGTTTCATCT
ATGGGCAGAA ATACGCAGGG AGTTACCTTA ATGAGAACAG GCGAAAATGA TCATATTGTT
GCGATTGCAA AAGTAATAAC AGAAGAAAAC GAAGAGAAAA AAATTCTAGA TATCTAG
 
Protein sequence
MASLTGKVIP LDINNEMKNS YLDYAMSVIV GRALPDVRDG LKPVHRRILY SLHELGLTPD 
KSYRKSAGIV GKVMQDFHPH GDSAIYDAMV RLAQDFASRY PLIQGHGNFG SIDGDPPAAM
RYTEARMAKI TLEMLADIDK ETVDFAPNYD NRTEEPTILP SKIPNLLVNG SSGIAVGMAT
NIPPHNMGEV IDGVLMMIKD PNVTPDDLMK VIKGPDFPTG ATIMGKDGIR QAYRTGRGSV
KMRAQTTIET KANGRPVIIV NEIPYQVNKA KLIEKIAELV KDKKIEGISD LRDESDRRGM
RIVIELKKDS NPNVILNLLY KHTQMQESFG IIMLALVNNE PKVLNLAQVI FHYLEHQKDV
ITRRTRYELK KAEARAHIVE GLRIALANLD EVIKTIRESK NTEEARRGLV DKFNLTEIQA
EAIVEMRLRS LTALEVEKLE KEYKELLEKI DYLRSILADE QKVLNIIRDE LLVVKEKFAD
ARRTLISNVA AGDFDIEDLI DEEDMVVTIT NQGYIKRISM DTYRSQKRGG KGITAMGTKE
EDFVRDLFIA STHHFLLFFT NKGKVYRLKV YEVPEASRTA KGTPIINLLS FDSDEYVTTV
IPIKEFEETA YLFMATKHGI VKKTALTEYN SSRRDGLIAI NLDEKDKLVA VELTHGKEEI
IMCTQEGIAI RFSEEDVRPM GRVTRGVKGI TLSQNDHVVK MDVIKEGASL LTVTANGYGK
RTPMDEYRIQ ARGGKGIINI KTTKRNGAVT GVLVVSEEDE VMMISAEGII IRINVKDVSS
MGRNTQGVTL MRTGENDHIV AIAKVITEEN EEKKILDI