| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0004 |
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| Symbol | recF |
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| ID | 4956144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 3256 |
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| End bp | 4371 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640179147 |
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| Product | recombination protein F |
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| Protein accession | YP_001111381 |
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| Protein GI | 134297885 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.106759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGGGTAA AAAAGTTATC TCTAAGGAAT TTCCGTAACT ACAAAGAAGC TCAATTTATC
CCTCATCCGT CCATAAATAT CATTACCGGT CCAAATGCCC AAGGGAAGAC AAACTTACTA
GAAGCTATTT ATTATAGTTT AAGGGGTTGC TCCTTCAGGG CTGAAAAAGA CAGGGATGTT
ACAAACTGGG AAAGTAACCA TACTGTTATC AATACAGAAG TTAATTTATC TTCTAGATTG
ATTAAACTGC AATGGAAAAT CCAAGAGGGT AGTAAAAAGT TATCCCTCAA CGGAGTAGAG
AGACCTCGCT CGGAGTTGGA TCTTTTTGGA GTTGTATTGT TTTGTCCAGA AGATTTATCT
TTAATAAAAG GTTCACCCCA GGAAAGAAGG CACTTTTTAG ACTATGAAGT AGGAACTTTA
AGCCCTGGCT ATAGCCAATT ATGGCGTCAG TATGCCAAGA TTTTAAGCCA AAGAAATAGT
CTGTTGAAAG AAATCAGGGA CCATCGATCA AAGCAAGAGG TATTAGAAGT TTGGGATGAA
CAACTATACA GGTATGGCGC TAAAGTAATT TATCTACGCT TACAAGTCCT AAAAAAATTA
ATTCCCATTG CCAGAAAAAC ACATTTTGGA CTCACTGGAG GAACTGAAGA ACTGCAAGCT
AAGTACCTGT CTTCACTGGT ATTAGAGCCT GGTTTAAGCG AAGGACAAAT TTATCAAGTT
TTTTCATCAT CCTCGAAAAA AATTCGCCAA ATGGAACTTA AAAGGTGTCA AACCCTTTTA
GGCCCTCACC GGGATGATTT ATCCCTAGCC ATAAATGGCG TTGAGGCAAA AACTTTTGGT
TCCCAGGGGC AGCAAAGAAC CGTGACATTA TCACTAAAAT TATCGCAGCT TGATTTGTGG
TACCATGAGT TTGGCGAATA TCCGGTATTA CTACTGGACG ATGTCTTATT CGAATTAGAC
CGAAGTAGGC AGAATATGCT GATTGATAAA ATTTTAAACA AGGTACAAAC CTTTATAACA
ACTAGTTTTA CAGGTGGTAT TGAAGAAACC ATAAAGGGTG CCGGACTCCT CTGGCAAGTA
AATGCTGGTA GTTTAACGCA AAAGGAGGAA TTTTGA
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| Protein sequence | MRVKKLSLRN FRNYKEAQFI PHPSINIITG PNAQGKTNLL EAIYYSLRGC SFRAEKDRDV
TNWESNHTVI NTEVNLSSRL IKLQWKIQEG SKKLSLNGVE RPRSELDLFG VVLFCPEDLS
LIKGSPQERR HFLDYEVGTL SPGYSQLWRQ YAKILSQRNS LLKEIRDHRS KQEVLEVWDE
QLYRYGAKVI YLRLQVLKKL IPIARKTHFG LTGGTEELQA KYLSSLVLEP GLSEGQIYQV
FSSSSKKIRQ MELKRCQTLL GPHRDDLSLA INGVEAKTFG SQGQQRTVTL SLKLSQLDLW
YHEFGEYPVL LLDDVLFELD RSRQNMLIDK ILNKVQTFIT TSFTGGIEET IKGAGLLWQV
NAGSLTQKEE F
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