Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0002 |
Symbol | |
ID | 4955700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1923 |
End bp | 3020 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640179145 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001111379 |
Protein GI | 134297883 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.610199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA TCTGTACCCG TCAAAATCTA ATTCAAGGCG TGACTACTGC TCAAAGGGCA GTATCTGCCA AAAACCCTCT GCCCATCCTA TCTGGTATTT TGTTAACAGC TAAAGATAAT AAACTTAAGC TGCAAGCAAC TGACCTGGAA ATGGGTATTC AATGTGTTGT TCCTTGCACA ACACAAGAAG AGGGTTCTAT TGTATTGCCC GCCAAATATT TAAGTGAAAT AGTAAGAAGA TTACCCGATT CTCCGATACA AATTGAATCA AATCAAGGTA CAAACGTAAT AATTCGCTAT GGGCAATCTG AAATTACAAT TAATGGTTTT GACGCAGAGG AATTCCCTAC TTTTCCTAAA CCACAAAGCA AGAATTCCTT AACCATTCCT GAAGAAGAAT TAAAAGAATA CTTACGACAG ATTCTCTTTG CCACCTTATC AGATGAAAAC AGACCAGTAT TTACCGGTGT TTTGATGGAA ATTTTAAATG GGACACTAAG ATTAGTGACA ACAGATACGC ACCGTCTTGC CATGCGAGAA ATAAAGGATT CATCCGTTGA TAATGATATA AACATTATTA TCCCTGGTAA AACTCTTAAT GAACTGACCA GGGTAATTGG TGCTGCTGAT CAACAAGTCA CCATTTCGCT AGGTGAAAAC CAAATAATTT TTGGGATGGA GGATACCCTA CTAATATCAA GACTTATTGA AGGTCAATTT CCTAATTACC GTCAGGTTAT TCCCCAGGGA CACAAAACAA GGATTCGACT TAAAACAAAG GATTTGCTAG AGGCCTCAGA AAGGGCATCT TTGTTGGCCC GAGTGGGCAC GCAAATTATT CGTTTAAACA TTGAAGAAGA AAAAATAATT CTCACTGCCA ATACTGAAGT AGGTAGGATT CACGAAGAGG TACCTGTTTA TTTACAAGGA GAATCTCTCC AAATTTCCTT TAATGCCATG TACCTAATTG ATGCGCTTCG GGCAATCGGC AGTGATAATA TATATTTTGA TCTGTCGGGT CCCCTCAGCC CAGGCATATT AAGACCTGTT GAGGGTGATG ATTACCTCTC ATTGATATTA CCAGTACGAA CAACTTAA
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Protein sequence | MKIICTRQNL IQGVTTAQRA VSAKNPLPIL SGILLTAKDN KLKLQATDLE MGIQCVVPCT TQEEGSIVLP AKYLSEIVRR LPDSPIQIES NQGTNVIIRY GQSEITINGF DAEEFPTFPK PQSKNSLTIP EEELKEYLRQ ILFATLSDEN RPVFTGVLME ILNGTLRLVT TDTHRLAMRE IKDSSVDNDI NIIIPGKTLN ELTRVIGAAD QQVTISLGEN QIIFGMEDTL LISRLIEGQF PNYRQVIPQG HKTRIRLKTK DLLEASERAS LLARVGTQII RLNIEEEKII LTANTEVGRI HEEVPVYLQG ESLQISFNAM YLIDALRAIG SDNIYFDLSG PLSPGILRPV EGDDYLSLIL PVRTT
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