Gene SNSL254_pSN254_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0192 
Symbol 
ID4929462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp172824 
End bp173357 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID642572489 
Producttransglycosylase SLT domain-containing protein 
Protein accessionYP_001102064 
Protein GI134047211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000000268096 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAACA AAGCCAAGGC GCTAGTTCTG TCTGCGGCTC TCCTTTCATC AACAGCGAAT 
GCTATTGACC TGAGCGGAAC CATCTTCGAC AAAGCAGCGA AAGCATATAA CCTCGACCCT 
CTTCTAGTGT ATTCGGTCGC ATTGGCCGAA TCTGCATCAG GGAGAGGTAA TGGCTCTATA 
AGTCCTTGGC CTTGGACGCT TCGCGTTCCT GGGCTTCCTT TCTATGCTAA GTCGGAAGAT 
CAGGCAAAGG CTAAGCTCGC TGAGTTTCAG CAGCAGTACG GTCGTGCCAT TGATGTCGGG 
TTTATGCAAG TGAGCATCCG GTGGAATGGT CATAGAGTTT CTTCTCCAGC AGATCTTCTC 
GACCCAGAGA CCAACGTCAT GGTTGGGGCA GAGGTGCTAT CAGAAGCCAT TCAGTCATCT 
CCAAATGACT TGGAGCTTGG CGTTGGCCGC TATCACGCCT GGGAAGACGA AATCCGAGCC 
AGAAACTATG GTAGCCGAGT CTTGGCTATC TATCGCAACC TTCGTGATTT GTGA
 
Protein sequence
MKNKAKALVL SAALLSSTAN AIDLSGTIFD KAAKAYNLDP LLVYSVALAE SASGRGNGSI 
SPWPWTLRVP GLPFYAKSED QAKAKLAEFQ QQYGRAIDVG FMQVSIRWNG HRVSSPADLL 
DPETNVMVGA EVLSEAIQSS PNDLELGVGR YHAWEDEIRA RNYGSRVLAI YRNLRDL