Gene SNSL254_pSN254_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0191 
Symbol 
ID4929542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp172552 
End bp172824 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content51% 
IMG OID642572488 
Producthypothetical protein 
Protein accessionYP_001102063 
Protein GI134047185 
COG category[K] Transcription 
COG ID[COG3423] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000000930698 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAAAT GCCAATTGAT AGACATCCCA AGCGACCCAG AGAAGAAACG TGAGTGGATC 
AAGTACAAAC TCAAGATCCA GGGGCTTTCT CTGGCCGCAT TGGGCAGAAA ACACAAAACA 
TCTCGGCAGG TGGTGTCTAC GGCACTCTAT AAGCCCAGTC CACGCTGGGA ACATGAGATA 
GCTACAGCTT TGGGTGTGAA GCCGTCTGAG ATTTGGCCGG AGCGGTACGA CGAAGAACAC 
GAAATACCCC TCAGACATAA GGAGGCAAGC TGA
 
Protein sequence
MDKCQLIDIP SDPEKKREWI KYKLKIQGLS LAALGRKHKT SRQVVSTALY KPSPRWEHEI 
ATALGVKPSE IWPERYDEEH EIPLRHKEAS