Gene SNSL254_pSN254_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0182 
Symbol 
ID4929443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp160530 
End bp161021 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content53% 
IMG OID642572479 
Producthypothetical protein 
Protein accessionYP_001102054 
Protein GI134047233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.117362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0819336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC AATCCTACGG CGAAAGTCTC AAATTTTTCT CAGACTGGCA GAAGGACCCC 
GCGAAACGCA CCGGCCTGAA TGTGCAACAC ACGCTAACCA GAGGTGAATA TCCTACGGTC 
AGCATCGAGA TTGCGCCGAT CAGGGCATCG GGGTCCAGCC CAGACTGGAA AAGCAAGATC 
ACGGTGCAGC TCACTCGCGG CGAACTGACG GCGTTTTGCA GCGTTCTCTT TGGTTTGCGT 
AGCAAGGCTG AGGGTTCCTA TCACGGCGAC GCGAAGAATA AGAGCTTTGC GGTTTACAAC 
AACGGCAAGG CCGGTGTTGC GATCATCCTT AGTGAGCGAG GAAACCAGCT CCAGAATTTC 
ATCAATGATG ACGACCGAAT GGAGCTCGCA GTCTTCGCAG TTCGCCAGCT TTCCAACGCA 
TGGAAAGTTA CCCCTTCTGA TGCCATCGCG CTGCTACGCC AATCAGCGTG GATGGACCGA 
AATTTGTCCT AA
 
Protein sequence
MTEQSYGESL KFFSDWQKDP AKRTGLNVQH TLTRGEYPTV SIEIAPIRAS GSSPDWKSKI 
TVQLTRGELT AFCSVLFGLR SKAEGSYHGD AKNKSFAVYN NGKAGVAIIL SERGNQLQNF 
INDDDRMELA VFAVRQLSNA WKVTPSDAIA LLRQSAWMDR NLS