| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0180 |
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| Symbol | |
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| ID | 4929523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 158649 |
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| End bp | 159659 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642572477 |
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| Product | phage integrase |
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| Protein accession | YP_001102052 |
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| Protein GI | 134047110 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.0996549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACGACA CAAACAATGA CAAGGAAGAG CTAGTTTCAC ATGCGAAAGT AAATGTTCCG
GCAGAACAAA GCATTCGCGG TGAACTGTTG CCGTCATCGA GCTCGCTCCG GAACATCCAG
GACAACCCCG CCGTCGCCTA TCTGGTGAGC CTCGGGTCAA AGCGAAGCAG GCAGACCATG
AGCTCATTCC TCAACATTGT CGCCAAGATG ATCGGGTTTC AGAACCTTCG TGACTGTGCA
TGGAGCTCAA TGAGGCGGCA CCACATATTG GCGGTGCTGG AAATGCTGGG GGATGCAGGG
AAGGCTCCGG CAACGATCAA CACCTACCTG TCAGCGCTCA AAGGGGTGGC TCTTGAAGCC
TGGACGATGA AGCAAATTGA TACGGATAGC TTCCAGCACA TTAAGCAAGT CCGTTCAGTA
CGTGGATCTC GACTTCCTAA AGGGCGGGCA CTTGAACGCC ATGAGATTCG CAGCCTCTTT
TTCACATGTG AAAGTGATTC AAGCGCCAAA GGGCTTCGGG ATGCGGCCAT TCTCGGGGTG
CTCCTCGGGT GTGGCTTGCG CCGCTCGGAA ATCGTTGCGC TGGACATGGG AAGCATGATC
TACAAGGACC GCGCTCTCAA GGTTCTTGGC AAGGGCAACA AAGAGAGAAT GGCGTATGTG
CCTGGTGGCG CATGGAAAAG ACTGGATAAG TGGGTTGAAG AGGTTCGAGG AACGCATGAA
GGGCCTTTAT TCCCGAGGAT CAGGCGGTTT GATGATGTGA CTGGAGAGCG GATGTCGGAT
CAGGCCATCT ACCACATCTT GGAGACCAGA AGAGTTGAAG CCGGTCTGGA GATGTTTGCG
CCCCATGACC TGCGACGCAC CTTTGCCTCC TCGATGCTGG ATAACGGTGA GGATATTGTG
ACCGTGAAGG ACGCAATGGG CCACTCAAGC ATTGCAACTA CCCAGAAATA TGACAGACGC
GGCGATGAGC GTTTGAAGAG AGCGAGCCAA CGCCTCGATA TAGCGGATTA A
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| Protein sequence | MHDTNNDKEE LVSHAKVNVP AEQSIRGELL PSSSSLRNIQ DNPAVAYLVS LGSKRSRQTM
SSFLNIVAKM IGFQNLRDCA WSSMRRHHIL AVLEMLGDAG KAPATINTYL SALKGVALEA
WTMKQIDTDS FQHIKQVRSV RGSRLPKGRA LERHEIRSLF FTCESDSSAK GLRDAAILGV
LLGCGLRRSE IVALDMGSMI YKDRALKVLG KGNKERMAYV PGGAWKRLDK WVEEVRGTHE
GPLFPRIRRF DDVTGERMSD QAIYHILETR RVEAGLEMFA PHDLRRTFAS SMLDNGEDIV
TVKDAMGHSS IATTQKYDRR GDERLKRASQ RLDIAD
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