Gene SNSL254_pSN254_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0169 
SymbolinsD2 
ID4929553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp148361 
End bp149365 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content48% 
IMG OID642572466 
Producttransposase InsD2 for insertion sequence IS4321L 
Protein accessionYP_001102041 
Protein GI134047142 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TTGCGCTCAT TGGTATCGAT CTGGGTAAAA ACTCTTTCCA TATTCATTGC 
CAGGATCGTC GCGGGAAGGC TGTTTACCGT AAAAAATTTA CCCGGCCAAA GTTGATCGAA
TTTTTGGCGA CATGCCCCGC TACAACCATC GCAATGGAAG CCTGTGGCGG TTCTCACTTT
ATGGCACGCA AGTTGGAAGA GTTGGGGCAT TCCCCAAAGC TGATATCACC ACAATTTGTC
CGCCCGTTCG TTAAAAGCAA TAAAAACGAC TTTGTCGACG CCGAAGCTAT TTGTGAAGCT
GCATCGCGTC CGTCTATGCG TTTTGTGCAG CCCAGAACGG AATCTCAGCA GGCAATGCGG
GCTCTGCATC GTGTCCGTGA ATCCCTGGTT CAGGATAAGG TGAAAACAAC CAATCAAATG
CATGCTTTTC TGCTGGAATT TGGCATTAGC GTTCCCCGAG GAGCTGCCGT TATTAGCCGA
CTGAGTACCA TTCTTGAGGA TAATAGTTTG CCTCTTTACC TCAGCCAGTT ATTGCTGAAA
TTACAACAGC ATTATCACTA TCTTGTTGAG CAGATTAAAG ATCTGGAATC CCAGTTGAAA
CGAAAGTTGG ACGAAGATGA GGTTGGACAG CGCTTGCTGA GCATTCCCTG CGTCGGAACA
CTGACAGCGA GTACTATTTC AACTGAGATT GGCGACGGGA AGCAGTACGC CAGCAGCCGT
GACTTTGCGG CGGCAACAGG GCTTGTACCT CGGCAGTACA GCACGGGAGG TAGGACGACA
TTGCTGGGAA TTAGTAAGCG AGGTAATAAA AAGATCCGAA CTTTGTTGGT TCAGTGTGCC
AGGGTATTCA TACAAAAACT GGAACACCAG TCTGGCAAAT TGGCCGATTG GGTCAGGGAT
TTACTGTGCC GGAAAAGCAA CTTTGTCGTC ACTTGTGCTC TGGCAAACAA GCTGGCCAGA
ATAGCCTGGG CCCTAACGGC ACGACAGCAA ACTTATGTAG CATAA
 
Protein sequence
MENIALIGID LGKNSFHIHC QDRRGKAVYR KKFTRPKLIE FLATCPATTI AMEACGGSHF 
MARKLEELGH SPKLISPQFV RPFVKSNKND FVDAEAICEA ASRPSMRFVQ PRTESQQAMR
ALHRVRESLV QDKVKTTNQM HAFLLEFGIS VPRGAAVISR LSTILEDNSL PLYLSQLLLK
LQQHYHYLVE QIKDLESQLK RKLDEDEVGQ RLLSIPCVGT LTASTISTEI GDGKQYASSR
DFAAATGLVP RQYSTGGRTT LLGISKRGNK KIRTLLVQCA RVFIQKLEHQ SGKLADWVRD
LLCRKSNFVV TCALANKLAR IAWALTARQQ TYVA