Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_pSN254_0169 |
Symbol | insD2 |
ID | 4929553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_009140 |
Strand | + |
Start bp | 148361 |
End bp | 149365 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642572466 |
Product | transposase InsD2 for insertion sequence IS4321L |
Protein accession | YP_001102041 |
Protein GI | 134047142 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA TTGCGCTCAT TGGTATCGAT CTGGGTAAAA ACTCTTTCCA TATTCATTGC CAGGATCGTC GCGGGAAGGC TGTTTACCGT AAAAAATTTA CCCGGCCAAA GTTGATCGAA TTTTTGGCGA CATGCCCCGC TACAACCATC GCAATGGAAG CCTGTGGCGG TTCTCACTTT ATGGCACGCA AGTTGGAAGA GTTGGGGCAT TCCCCAAAGC TGATATCACC ACAATTTGTC CGCCCGTTCG TTAAAAGCAA TAAAAACGAC TTTGTCGACG CCGAAGCTAT TTGTGAAGCT GCATCGCGTC CGTCTATGCG TTTTGTGCAG CCCAGAACGG AATCTCAGCA GGCAATGCGG GCTCTGCATC GTGTCCGTGA ATCCCTGGTT CAGGATAAGG TGAAAACAAC CAATCAAATG CATGCTTTTC TGCTGGAATT TGGCATTAGC GTTCCCCGAG GAGCTGCCGT TATTAGCCGA CTGAGTACCA TTCTTGAGGA TAATAGTTTG CCTCTTTACC TCAGCCAGTT ATTGCTGAAA TTACAACAGC ATTATCACTA TCTTGTTGAG CAGATTAAAG ATCTGGAATC CCAGTTGAAA CGAAAGTTGG ACGAAGATGA GGTTGGACAG CGCTTGCTGA GCATTCCCTG CGTCGGAACA CTGACAGCGA GTACTATTTC AACTGAGATT GGCGACGGGA AGCAGTACGC CAGCAGCCGT GACTTTGCGG CGGCAACAGG GCTTGTACCT CGGCAGTACA GCACGGGAGG TAGGACGACA TTGCTGGGAA TTAGTAAGCG AGGTAATAAA AAGATCCGAA CTTTGTTGGT TCAGTGTGCC AGGGTATTCA TACAAAAACT GGAACACCAG TCTGGCAAAT TGGCCGATTG GGTCAGGGAT TTACTGTGCC GGAAAAGCAA CTTTGTCGTC ACTTGTGCTC TGGCAAACAA GCTGGCCAGA ATAGCCTGGG CCCTAACGGC ACGACAGCAA ACTTATGTAG CATAA
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Protein sequence | MENIALIGID LGKNSFHIHC QDRRGKAVYR KKFTRPKLIE FLATCPATTI AMEACGGSHF MARKLEELGH SPKLISPQFV RPFVKSNKND FVDAEAICEA ASRPSMRFVQ PRTESQQAMR ALHRVRESLV QDKVKTTNQM HAFLLEFGIS VPRGAAVISR LSTILEDNSL PLYLSQLLLK LQQHYHYLVE QIKDLESQLK RKLDEDEVGQ RLLSIPCVGT LTASTISTEI GDGKQYASSR DFAAATGLVP RQYSTGGRTT LLGISKRGNK KIRTLLVQCA RVFIQKLEHQ SGKLADWVRD LLCRKSNFVV TCALANKLAR IAWALTARQQ TYVA
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