Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_pSN254_0160 |
Symbol | insB4 |
ID | 4929480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_009140 |
Strand | - |
Start bp | 142094 |
End bp | 142816 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642572457 |
Product | transposase InsB4 for insertion sequence IS26 |
Protein accession | YP_001102032 |
Protein GI | 134047196 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0865619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGATGG AGCTGCACAT GAACCCATTC AAAGGCCGGC ATTTTCAGCG TGACATCATT CTGTGGGCCG TACGCTGGTA CTGCAAATAC GGCATCAGTT ACCGTGAGCT GCAGGAGATG CTGGCTGAAC GCGGAGTGAA TGTCGATCAC TCCACGATTT ACCGCTGGGT TCAGCGTTAT GCGCCTGAAA TGGAAAAACG GCTGCGCTGG TACTGGCGTA ACCCTTCCGA TCTTTGCCCG TGGCACATGG ATGAAACCTA CGTGAAGGTC AATGGCCGCT GGGCGTATCT GTACCGGGCC GTCGACAGCC GGGGCCGCAC TGTCGATTTT TATCTCTCCT CCCGTCGTAA CAGCAAAGCT GCATACCGGT TTCTGGGTAA AATCCTCAAC AACGTGAAGA AGTGGCAGAT CCCACGATTC ATCAACACGG ATAAAGCGCC CGCCTATGGT CGCGCGCTTG CTCTGCTCAA ACGCGAAGGC CGGTGCCCGT CTGACGTTGA ACACCGACAG ATTAAGTACC GGAACAACGT GATTGAATGC GATCATGGCA AACTGAAACG GATAATCAAC GCCACGCTGG GATTTAAATC CATGAAGACG GCTTACGCCA CCATCAAAGG TATTGAGGTG ATGCGTGCAC TACGCAAAGG CCAGGCCTCA GCATTTTATT ATGGTGATCC CCTGGGCGAA ATGCGCCTGG TAAGCAGAGT TTTTGAAATG TAG
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Protein sequence | MLMELHMNPF KGRHFQRDII LWAVRWYCKY GISYRELQEM LAERGVNVDH STIYRWVQRY APEMEKRLRW YWRNPSDLCP WHMDETYVKV NGRWAYLYRA VDSRGRTVDF YLSSRRNSKA AYRFLGKILN NVKKWQIPRF INTDKAPAYG RALALLKREG RCPSDVEHRQ IKYRNNVIEC DHGKLKRIIN ATLGFKSMKT AYATIKGIEV MRALRKGQAS AFYYGDPLGE MRLVSRVFEM
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