| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0155 |
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| Symbol | istA |
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| ID | 4929498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | - |
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| Start bp | 136735 |
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| End bp | 138258 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642572453 |
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| Product | transposase IstA for insertion sequence IS1326 |
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| Protein accession | YP_001102028 |
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| Protein GI | 134047140 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.791462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAAACG TGGCGATATT GAGCGCAATT CGACGCTGGC ATTTTCGCGA TGGTGCGTCG
ATTCGGGAAA TAGCCCGACG AAGCGGCCTG TCCAGGAACA CCGTTCGCAA GTATTTGCAA
AGCAAGGTGG TTGAACCGCA GTACCCAGCG CGAGACAGCG TTGGCAAGTT AAGTCCTTTT
GAGCCCAAGT TAAGGCAGTG GCTCTCCACC GAGCACAAAA AGACAAAGAA GCTGCGCAGA
AACCTGCGCA GCATGTACCG GGATTTGGTC GCTTTGGGCT TTACCGGGTC TTATGACCGA
GTGTGTGCCT TTGCCCGACA GTGGAAAGAT TCCGAACAGT TCAAGGCGCA AACCTCGGGC
AAGGGTTGTT TCATCCCCTT GCGCTTTGCT TGTGGCGAAG CCTTCCAATT CGATTGGAGT
GAGGACTTTG CCCGCATAGC GGGCAAACAG GTCAAACTTC AGATTGCCCA GTTTAAGTTG
GCCCACAGCC GGGCCTTTGT GCTTCGGGCT TACTACCAGC AAAAACATGA AATGCTGTTT
GATGCCCACT GGCATGCCTT TCAAATCTTC GGTGGCATTC CCAAGCGCGG CATCTACGAC
AACATGAAGA CCGCTGTGGA TTCGGTGGGG CGTGGCAAAG AGCGCAGGGT CAATCAGCGG
TTCACTGCCA TGGTCAGCCA CTACCTGTTT GATGCGCAGT TCTGTAATCC AGCATCGGGT
TGGGAGAAAG GCCAGATTGA GAAGAACGTG CAGGATTCCC GCCAACGCCT GTGGCAAGGG
GCACCAGACT TTCAAAGCCT TGCTGATTTG AATGTGTGGC TTGAGCATCG CTGCAAAGCG
CTGTGGTCTG AGCTGCGCCA CCCCGAATTG GACCAAACCG TGCAAGAGGC CTTTGCCGAT
GAACAAGGCG AGTTGATGGC GCTACCCAAT GCCTTTGATG CATTCGTGGA GCAAACCAAG
CGAGTCACTT CAACCTGCCT TGTTCACCAC GAGGGCAATC GCTACAGCGT TCCTGCCAGT
TACGCCAACA GGGCCATCAG CCTTCGGATT TATGCAGACA AGCTGGTGAT GGCTGCCGAA
GGCCAACACA TTGCCGAGCA TCCAAGATTG TTTGGCAGTG GCCACGCTCG GCGTGGCCAC
ACACAATACG ACTGGCACCA TTACTTGTCT GTGCTTCAGA AGAAACCTGG GGCGTTGCGC
AATGGTGCGC CATTTGCTGA ATTGCCACCC GCGTTCAAGA AGCTTCAATC CATCTTGCTG
CAACGCCCCG GCGGTGACCG TGACATGGTG GAAATTCTGG CCCTTGTATT GCACCACGAT
GAAGGTGCGG TACTCAGTGC TGTGGAATTG GCATTGGAGT GTGGCAAGCC ATCGAAGGAG
CATGTGCTTA ATCTGTTGGG ACGTTTGACC GAAGAACCTC CACCCAAACC GATTCCAATT
CCCAAGGGGT TAAGGCTGAC ATTGGAACCA CAGGCCAACG TGAACCGCTA TGACAGTTTA
AGGAGAGCCC ATGATGCAGC ATGA
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| Protein sequence | MINVAILSAI RRWHFRDGAS IREIARRSGL SRNTVRKYLQ SKVVEPQYPA RDSVGKLSPF
EPKLRQWLST EHKKTKKLRR NLRSMYRDLV ALGFTGSYDR VCAFARQWKD SEQFKAQTSG
KGCFIPLRFA CGEAFQFDWS EDFARIAGKQ VKLQIAQFKL AHSRAFVLRA YYQQKHEMLF
DAHWHAFQIF GGIPKRGIYD NMKTAVDSVG RGKERRVNQR FTAMVSHYLF DAQFCNPASG
WEKGQIEKNV QDSRQRLWQG APDFQSLADL NVWLEHRCKA LWSELRHPEL DQTVQEAFAD
EQGELMALPN AFDAFVEQTK RVTSTCLVHH EGNRYSVPAS YANRAISLRI YADKLVMAAE
GQHIAEHPRL FGSGHARRGH TQYDWHHYLS VLQKKPGALR NGAPFAELPP AFKKLQSILL
QRPGGDRDMV EILALVLHHD EGAVLSAVEL ALECGKPSKE HVLNLLGRLT EEPPPKPIPI
PKGLRLTLEP QANVNRYDSL RRAHDAA
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