Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_pSN254_0149 |
Symbol | insF |
ID | 4929460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_009140 |
Strand | + |
Start bp | 132167 |
End bp | 133402 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642572447 |
Product | transposase InsF |
Protein accession | YP_001102022 |
Protein GI | 134047197 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGCA AGAAGAAGAC GCCGGTGGTC ACGCCGGCCA TTGATCTGCC GAAGGAATTT CTCGAGAAGC TGATCCCGGG TCCGATGGAC GCGGCCGGGG TCGAAGCCGT GTTCCAGCAG CTGAAGAAGG CCGTGATCGA GCGGGCGCTG GGCGCGGAGC TCGGCCTGCA CCTGGCCGAC GCCGAGGGCG GGAGCGGCAA CCACCGCAAC GGCCGCAGCG GCAAGACGGT GCTGACCGAC GAGGGTCCGC TGCGCATCGA CGTGCCGCGC GACCGGACGG GTACGTTCGA GCCGCAGCTG ATCCCCAAGC ACGAGCGTCG CTTCGCCGGG TTCGACGATC GGATCGTCTC GATGTACGCC CGCGGCATGA CGGTGCGTGA GATCCAGGGG CACCTGGCCG AGATGTACAG CGTCGAGGTG TCGCCGGAGT TCATCAGCAA GGTCACCGAC GAGGTGATGG CCGAGGTCAC CGCATGGCAG GCGCGGCCGC TGGAAGCGAT GTATCCGGTG GTGTTCTTCG ACGCGCTGCG GGTGAAGATC CGCGAGGACG GCGTGGTGCG CAACAAGGCG GTGTATCTGG CGCTGGGCGT GCTGGCCGAC GGCACCCGCG ACATCCTCGG GCTGTGGATC GAGAACACCG AGGGCGCGAA GTTCTGGATG AAGGTGTTCA ACGACCTCAA GACGCGCGGC GTCAACGACA TCCTGATCGG CGTGGCTGAC GGCCTGAAGG GCTTCCCGGA GGCGCTGGAA GCGGTGTTCC CGGCGACCAC GCTGCAGACC TGCATCGTGC ACCTGATCCG CAACAGCCTG GACTATGCGG GCTGGAAGGA CCGCAAGGCG CTGGCGGCGG CGATCAAGCC GATCTACACG GCCCCGACCG CCGAGGCCGC AGAGGCCGAG CTGGATGCGT TCGAGGCCGG CGACTGGGGC GAGCGCTTCC CGACGGTGGT CGCCGCCTGG CGCCGTGCCT GGACGCGCGT GGTGCCGTTC TTCGCGTTCC CGCCGGACGT GCGCCGGGTG ATCTACACGA CCAACGCAAT CGAGAGCGTG CATGCGCGCC TGCGCAAGAT CATCAAGACC CGCGGCCACT TCCCCAGCGA CGAGGCCGCC ACCAAGCTGA TCTGGCTGGC GCTGCGGAAC ATCACCGCCG AGTGGAGCCG CGCGTCTCAG CACTGGAAGG CGGCGATGAA CCAGTTCGCG ATAATCTACG AAGACCGATT CACGCTGGCT CGCTGA
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Protein sequence | MPRKKKTPVV TPAIDLPKEF LEKLIPGPMD AAGVEAVFQQ LKKAVIERAL GAELGLHLAD AEGGSGNHRN GRSGKTVLTD EGPLRIDVPR DRTGTFEPQL IPKHERRFAG FDDRIVSMYA RGMTVREIQG HLAEMYSVEV SPEFISKVTD EVMAEVTAWQ ARPLEAMYPV VFFDALRVKI REDGVVRNKA VYLALGVLAD GTRDILGLWI ENTEGAKFWM KVFNDLKTRG VNDILIGVAD GLKGFPEALE AVFPATTLQT CIVHLIRNSL DYAGWKDRKA LAAAIKPIYT APTAEAAEAE LDAFEAGDWG ERFPTVVAAW RRAWTRVVPF FAFPPDVRRV IYTTNAIESV HARLRKIIKT RGHFPSDEAA TKLIWLALRN ITAEWSRASQ HWKAAMNQFA IIYEDRFTLA R
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