Gene SNSL254_pSN254_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0137 
Symbol 
ID4929494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp117556 
End bp119283 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content53% 
IMG OID642572436 
Producthypothetical protein 
Protein accessionYP_001102011 
Protein GI134047267 
COG category[S] Function unknown 
COG ID[COG4643] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.939802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACT ACAAAGCTGA CACCGTTCGT GAAGCTGCAA ACGGAAACTG GCTATTCATC 
CTGGCGGCCC TAGCGCCCCA TCTTGAACCA GCTCTCCGTA AACCTGGTCG TCATGTTTCT
TGTCCTATCC ACGGCGGGAA AGATGGCTTC CGACTGTTCA AGGATGCCCA CCTGACTGGT
GGCGGCGTAT GCAATACATG CGGTGCCAAT CATGATGGTT TTGAGCTGCT GATGTGGCTC
AATAACTGGG ACTTTAAACA GTGCCTGAGC GAGGTTGGTG ATTATCTGGG CGTTGAGAAA
GAGCAACCCC AGTATCAACA AGCCGCTGCA CCGACACGAG CTCCTGTCCA GGCCAAAGCG
CCTGTTCAGC AAGAGCCTAT GAAGGTGAAT AACAAGGTTC TCGATTCCAA GAATCGTAAA
AAATCCATTG CCGGTACTCT GATTGCCCAC GGTAAAGCTC CTTATGAGCA TAACGAAGAC
AACGAGCTCA GCTACTTTGC CTTCATCCGT GACAAGAGCG GTTTGGAACG CACCATCTGG
GGCGTGGATC TTGAAAGAGC CATTGGTGAA AGTGAAGCCA AGTATGGGGA TGAGATCGTC
ATGACAAACC TCGGGCGCGA GCCTGTAACT GTCGTCGTTG AAGTTAAGGA CGAGCAGGGG
AATGTTGTGA GAGAACAACC TATGCAAACG CATCGCAACA CCTGGCTGGT GGAACGTCGC
GGCGCTACGG TAACGCAGTT CCGCGCTCGC TCGAACGGTG GTGTTGAGCC GGTGAGTCAC
CATGTTGAGT CGGCCCCTGT GGTCAACCGC AAGGTAGAAA CTCCGGCACC GCAAGTACAA
CCTGCGGCCA CACAACCGGA AGAGCAAAGC AGCGAAAATA AGCCGAAAGT TGTTCCGATG
TTTCGTGAAC AACCTAAGCC TTGGTTGCTT GAGCTCCAAG AAGAAATGGA GAAGAGAATG
GAGCGCGAAC GCGCTTACAG TGCTCGTCTC CGTGAGAAAA TCGAGAAGGT ATGGAACGAG
TGTTTGCCGT TCTCCAGTCA TGTGACTGAG CCAATGCGTC TGTACTTCAA AAACCGCGAG
CTGCTGTTCA AAGTTGATGA AGTAGAAAAA ACAGACTGTC TGCGGTTCAA TCCGGCTATG
GCCTACTACG ACGAAGATGG CAATGAAGTT GGGAAATTCC CGGCTATCGT CTGCGCTATC
CGAGATGTGG AAGGCAACCT GGTAACGCTC CACCGCACCT ATCTCACCCA AAACGGTAAA
AAAGCCAAGG TCGGCAACGC CAAAAAGATG ATGCCCATTC CTGACGGTTT GGATGTCAAT
GGCGCGGCCA TCCGCCTCGG TGAACCGACT GAGGGTATCC TGGGTGTTGC AGAAGGGCTG
GAAACAGCTC TGTCAGCTTA TCGAGTCACT CAAATCCCGG TTTGGTCAAC GGTCAATGCC
ACCCTAATGG AGTCCTTCGA GGTTCCAGAA GGTGTTCACA CCGTACTGAT CTGGGCTGAC
AAAGATAAGT CTGTGACTGG GGAGAAGTCA GCGAACGTGC TGAAAGCCAA GCTGGAGAAG
CGCGGCATTC GTGTGTACGT CCTGCTGCCT AAGCTCCCGA TCCCGCCCAG AGCGAAAGGG
ATTGACTGGA ACGATGTCCT GATGAGTCAG GGAAGCCTCG GTTTCCCGAA TGCTCGCTAC
CTGCGCGATT TCATTGCGAG AAGGAGAGCT GAGTATGGCC GTCATTGA
 
Protein sequence
MSYYKADTVR EAANGNWLFI LAALAPHLEP ALRKPGRHVS CPIHGGKDGF RLFKDAHLTG 
GGVCNTCGAN HDGFELLMWL NNWDFKQCLS EVGDYLGVEK EQPQYQQAAA PTRAPVQAKA
PVQQEPMKVN NKVLDSKNRK KSIAGTLIAH GKAPYEHNED NELSYFAFIR DKSGLERTIW
GVDLERAIGE SEAKYGDEIV MTNLGREPVT VVVEVKDEQG NVVREQPMQT HRNTWLVERR
GATVTQFRAR SNGGVEPVSH HVESAPVVNR KVETPAPQVQ PAATQPEEQS SENKPKVVPM
FREQPKPWLL ELQEEMEKRM ERERAYSARL REKIEKVWNE CLPFSSHVTE PMRLYFKNRE
LLFKVDEVEK TDCLRFNPAM AYYDEDGNEV GKFPAIVCAI RDVEGNLVTL HRTYLTQNGK
KAKVGNAKKM MPIPDGLDVN GAAIRLGEPT EGILGVAEGL ETALSAYRVT QIPVWSTVNA
TLMESFEVPE GVHTVLIWAD KDKSVTGEKS ANVLKAKLEK RGIRVYVLLP KLPIPPRAKG
IDWNDVLMSQ GSLGFPNARY LRDFIARRRA EYGRH