Gene SNSL254_pSN254_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0116 
Symbol 
ID4929446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp103468 
End bp104367 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content51% 
IMG OID642572415 
Producthypothetical protein 
Protein accessionYP_001101990 
Protein GI134047202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGG ACGCCATGTT CAAATCATCA GTATGCTCCT ACGAAAACAG GGGGCCTTAC 
GGAAACAACA AGTACCGAGG CAACTGCTCG GGCTTTATCG TTAAAGACTT CATTGAGTCT 
TACATGAGAA AGCCGAACGG GCTGGTGGCA GACCCAAGTG TTGGGGGTGG CTCTAGCATC 
GACGTTGCCA ATGAACTTGG TGTCCGTTTC AAAGGGACAG ACTTGCATCA GGGGTTCAAC 
CTGTTGCGGG ATGACTTCCT TTCGTTCCTC GGAGAGCCTG CACACCTGAT CTGGTGGCAC 
CCTCCTTACT GGGACATGAT CCAGTATTCA GGTAAGCAGT GGGGCGAGCC CAACAAATGG 
GATATGAGCC GCATGAATTT GCCTGAGTTC GTTGAAGCCC TTGAGCTGGC CGTTATGAAT 
ATTCATGACG CCTGTGAGCG AGGAGGGCAT TACGGAATCC TCATGGGAAA CCTGAGGCGC 
GATGGGGATT ATTTCAACCT GTCCAGCCTT GTGGAACGTA TCGCACCTGG GAAGCTGGTG 
GATGAGATCA TCAAAACACA GCACAACTGT GTGAGTGACC GAACTCAGTA TTCCGGGAAG 
CTGGTGCGTA TCGCCCATGA AAAGCTGTTG GTGTTTCGTC GTAACGACGT TGCCTCATCG 
CTCTGTCTTC TTGCTGCCGT ACACCGTCGA GCAACCAATA TGGTTTCGAC TACGTGGAAA 
GCTGCAATAC GCCGAACCCT ACAGGGGAAA ACGTTGAAGC TGGAGCAGAT TTACAAAGAG 
ATTGAACCCT ACGCAAAGCA TCGAGAGAAC AACCACTGGC AAGCAAAGGT CAGGCAAGTT 
CTTCAAGATG CCAGGTTCTT TATTCGCATC GAGGTAGGTG TCTATGCACT TGCTGAGTAG
 
Protein sequence
MMEDAMFKSS VCSYENRGPY GNNKYRGNCS GFIVKDFIES YMRKPNGLVA DPSVGGGSSI 
DVANELGVRF KGTDLHQGFN LLRDDFLSFL GEPAHLIWWH PPYWDMIQYS GKQWGEPNKW 
DMSRMNLPEF VEALELAVMN IHDACERGGH YGILMGNLRR DGDYFNLSSL VERIAPGKLV 
DEIIKTQHNC VSDRTQYSGK LVRIAHEKLL VFRRNDVASS LCLLAAVHRR ATNMVSTTWK 
AAIRRTLQGK TLKLEQIYKE IEPYAKHREN NHWQAKVRQV LQDARFFIRI EVGVYALAE