Gene SNSL254_pSN254_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0114 
Symbol 
ID4929456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp102279 
End bp102818 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID642572413 
Producthypothetical protein 
Protein accessionYP_001101988 
Protein GI134047195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.103616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.851631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATC TGAACAATCT CAAATCCGTA ATGATCTCTC TCGCCGCCGA ACATAAGCTG 
CCTGAAATCT ACCAGGATGA CATCACTACC GATGTGGAGT CTCTGGATCG ATTCGATGGT 
TTACGTCTGG TCTGGCTGTT GCGGTCTTGC GGCAGCGTAT TGGTGCCAGC GGAAGTTGGC 
GTTAATCCGA TCTATATCAC CCATTGGTTG TGGTCTAACC ACGGTCAACA GGTGGTTCCA 
TTCTCTGTGG ATACCCGCAC GGGGTTGATT GAAAAAATCG ACTTCGAGCA AGCTGAAAAG 
CTGATCATGC AGATGCCTTG CAACCTCTCT TCATTGCAGA ACAAGGAATA CTTGGTTGAC 
CAGGTAAACC GAGTATTGCA ACGAGGTTGT GAAATGCGTA TCTGGGGTAT CTTCGAGTCT 
CCAAGCTCGG TGGAATCCGT TGGTGGTTGG AAAGAGTGGC AGAGCTATTT CAGCTCTACT 
GGGAATCGAC TGATGGCCGA TTTCGTTGGT AAAGCCATTC GATTCACCAA CCCTCGATAA
 
Protein sequence
MSHLNNLKSV MISLAAEHKL PEIYQDDITT DVESLDRFDG LRLVWLLRSC GSVLVPAEVG 
VNPIYITHWL WSNHGQQVVP FSVDTRTGLI EKIDFEQAEK LIMQMPCNLS SLQNKEYLVD 
QVNRVLQRGC EMRIWGIFES PSSVESVGGW KEWQSYFSST GNRLMADFVG KAIRFTNPR