Gene SNSL254_pSN254_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0111 
Symbol 
ID4929558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp98459 
End bp99736 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content51% 
IMG OID642572410 
Producthypothetical protein 
Protein accessionYP_001101985 
Protein GI134047122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.260276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAG TGAACCATCT ACAAAGCCTC TGTGTTATCC ACGTAGACTT TGACATCTGG 
AGTGGACAAA CCCGTTTGTC TGCATCTGAT CTCAAGCTGG GCGAGGGTGG TGAAATTCCA 
CCTGAGAAAG TAGCTCAACT GGGAAGTAAG AAGATCTGTG ATCCGGCTAA GCTGAAAGGC 
TTTCATCGCC TGAAAACAGA AACTCGTCGC CTCCTGCTGA AATTCGGTAT GCCGTTCATG 
AACGGATTTG CCGTACCCGT CAGCAAGACC GATGAAATCT GTAACAAGCT GAATGACATC 
AACTTTCAGT TTAACCAACT GAAACAGGAT TTCATCAAAG GTTACAACAA AGCCGTGGAT 
GAATGGTGTC AGGAGAACCC TGAGTATGAA CGAGCTATCC GTGCCGGAGC CCTTCCAAAG 
GAAACGGTCG AGGAGCGGAT TGGCTTTGAG TACCAGGTGT TCATGATCCA GCCTGTGAAC 
GAAGATGAGG CCAACGCCAA ACGCCTTAAC CGCAAGGTTG AGCGCCTGGG TGACGATCTC 
ATCTCCGAAG TGGTTCAGGA AGCGAATAAG TTCTATATGG AACGTTTGGC CGGTCGAGAC 
CAATGTGCGG TCACTACTCG GCAGACACTC CGTAACATCC GCGACAAGGT GGATGGGCTT 
AGCTTCCTGA ACAGCGCTTT TAACCCTCTG GTCAAGCTGC TCGACCAAAC CCTCCGGGGA 
TACGAGCAAC ATGCCGATGG CCGAAACATC GTTGCGCCTT TCTTTTATCA GGTCGTGGCC 
GCAGTGCTGA TCATGAGCGA GAGGGACCGC ATCGAGCAGT ATGCCAATGG CTCGATTACT 
GTAGAGGGCA TGGCTAATGA CATTGGCGGT TCGGGAGCCC AGATGGGGGA CCGTTCTAAA 
GATGAAAAGG CCGAACAGAA AAGCGATAAA GCCGGTGAGC TTATCCCTGC AACAGAGGGT 
GGCGAAACCA AGCAGCAACA GGTAGGTGGT ACTGAATCTG TTCAATCAGA ACAGACTAAC 
AGCGGTGGTA ACTCTGTTGA CCTGGATGAA GACATCGACA ACTTCTTCAA GAGTTTTGCA 
GAACGAGGCG AGGGTGAATC GGAAGATGAA TCCAATGCCG GTGATGTGGT TCGAGAAGAG 
CGTGTTGATG TTGAGGATGA GCTGGTTTTG CCTGAGGAAA CTCCGGTAGA GCAAGAGCCT 
GTCCAAGAGG AGACGACAGA GGAGCCTCTC AACCAGGAGC TGCCTAAAAC TGACGACGAT 
GGCGACTATT TCTTCTAA
 
Protein sequence
MTKVNHLQSL CVIHVDFDIW SGQTRLSASD LKLGEGGEIP PEKVAQLGSK KICDPAKLKG 
FHRLKTETRR LLLKFGMPFM NGFAVPVSKT DEICNKLNDI NFQFNQLKQD FIKGYNKAVD 
EWCQENPEYE RAIRAGALPK ETVEERIGFE YQVFMIQPVN EDEANAKRLN RKVERLGDDL 
ISEVVQEANK FYMERLAGRD QCAVTTRQTL RNIRDKVDGL SFLNSAFNPL VKLLDQTLRG 
YEQHADGRNI VAPFFYQVVA AVLIMSERDR IEQYANGSIT VEGMANDIGG SGAQMGDRSK 
DEKAEQKSDK AGELIPATEG GETKQQQVGG TESVQSEQTN SGGNSVDLDE DIDNFFKSFA 
ERGEGESEDE SNAGDVVREE RVDVEDELVL PEETPVEQEP VQEETTEEPL NQELPKTDDD 
GDYFF