Gene SNSL254_pSN254_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0109 
Symbolbet 
ID4929508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp96197 
End bp97186 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content51% 
IMG OID642572408 
Productphage recombination protein Bet 
Protein accessionYP_001101983 
Protein GI134047188 
COG category 
COG ID 
TIGRFAM ID[TIGR01913] phage recombination protein Bet 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.237618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA ACAAATCTCT TGTAACCCGT ATCGCAAGCC GGTTTGGCGT GGACACCCGA 
AAGTTCTATG AAACTTTGAA GGCGACCGCA TTCAAGCAGC GAGATGGAAG TGCCCCGACC
GATGAGCAGA TGATGACGCT CCTGATCGTG GCTGAACAGT ACGGTTTGAA CCCTTTCACT
CGGGAAATCT ATGCGTTTCC TGACAAGCAA AATGGGATCA TTCCGGTAGT AGGTGTTGAT
GGTTGGAGCC GCATCATCAA CGAGCATCCC CAGTATGATG GCGTCGAGTT CGTGTATTCG
GACAAGATGG TCAGAATGCA GGGGGCGAAA GTTGACTGCC CTGAGTGGAT TGAATGCGTG
ATTTACCGTA AGGACAGATC TCGCCCTATC CGCATCAAGG AGTTCATTGA TGAGGTGTAC
CGTGAACCGT TTCAGGGTCA AGGTCGCAAT GGTGCTTACA CTGTTGATGG CCCCTGGCAA
ACGCACACCA AGCGTCAACT CCGGCACAAG TCGCTGATCC AGTGTTCTCG TGTCGCATTT
GGTTTCTCTG GTATTTATGA CCAGGATGAA GCTGAACGCA TCCGTGAAAT GGAGCAGGCA
TCGGCCATTA ACCCGGCTAT TGCCAATCTC CCTTCACCAT CTCAAGTTCA AAGCCAAGAG
CCTTTGGCTA TTGAGCACAA AGAGCTTGAC CCGATCCTAA CCAAACTCGC AAATCGCGCC
ATTGCTGAAA ACGCATGGTC TGCGGCGCAT GAGTATGTGA AGGGACGGTA TGAAGGTTCG
GAACTGCAAT ATGCGACTCA ATTCCTTCGT GACAAGGAGA TGGATCAAAT GGAGCCTCCG
AAACCTGACT ACCAGGAAGC GCACGAGCAA GAGTCCGCCG CTGGTGGTTC TGCAAATGCT
GAACCTGGTG CCGAAGAAAT GCCGCCTTTG AGTGACGAGG ACATGATCCC TGTTACAGAA
GAGGAGGGCG CGGAAGGCAG TTACTACTAA
 
Protein sequence
MSDNKSLVTR IASRFGVDTR KFYETLKATA FKQRDGSAPT DEQMMTLLIV AEQYGLNPFT 
REIYAFPDKQ NGIIPVVGVD GWSRIINEHP QYDGVEFVYS DKMVRMQGAK VDCPEWIECV
IYRKDRSRPI RIKEFIDEVY REPFQGQGRN GAYTVDGPWQ THTKRQLRHK SLIQCSRVAF
GFSGIYDQDE AERIREMEQA SAINPAIANL PSPSQVQSQE PLAIEHKELD PILTKLANRA
IAENAWSAAH EYVKGRYEGS ELQYATQFLR DKEMDQMEPP KPDYQEAHEQ ESAAGGSANA
EPGAEEMPPL SDEDMIPVTE EEGAEGSYY