Gene SNSL254_pSN254_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0102 
Symbol 
ID4929439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand- 
Start bp90676 
End bp91536 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content52% 
IMG OID642572401 
Productputative lipoprotein 
Protein accessionYP_001101976 
Protein GI134047164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000340796 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.125568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG CTTTAATCAC CACCGTGGCT CTGGCTGTAG CAGCTCTATC TGGCTGTGCA 
TCCACCAGCA GTTACGAACC CACAGCGTAC AAAACCAATC ACAGTCGCGC TTACAACATC 
GCGGAGGCCG GTGGCCTGGT AACAGGCATC CAAGACGCTT CTGTTCCGCG TGACAAGCTG 
GAGCGTCTGA CCGACACCAA AACGTTTGGG GCAGCCTACG TGCTGTCTGG CTACATGTCC 
CCTCAGCTCG GAATGACCGA CTGGCAAGGT GGCTTGGTCA ACCTTGCGAA CTGGGCTATC 
GGCCCCAAAC AGCATGGCGC TCGCAATAGC TTGATCGCTT GGATGCCTGC TAACGAAGCA 
GTTTCACCGG CAGACGCTCA GGCCAAATTT CTTTCACATG TGAAAGTTTC CATTGAGTCA 
GCGCTGACTG ATTTGGGTGC CAATTTCACG CTTCTGTATG ACAAAGACGG TCGCCTAACC 
TATCAGTTCT ACAAGAATGA ATGGGGTTGC CCGACGTGGG TGAACGGACA AAGTAAGGTA 
GCTGACATGT GTTCCGTTAA GGTGAAAATC GTGGAGCCTC GCCTAGGGTC AGCTCCTAAT 
TTTGTCTCTG GCGTTCAAGG TACAGCGTAT GCCTTCACAT CAGGCCATGA GACCGCATAC 
AACTTTGTGA ATGTCGGTAA TGGGGCAGCA AGCCATGCTC CTCAGCAAGC GATCTACGCA 
GCTATTAGCA AACAGCTACC AGCTTGGGCC TACCTCTACC TTGCTCCAAA ATCGGTTGAG 
CTGGATAATG GCGAAAAAGT TGCTTTCCCT TACCTTCTTG ATCAGGGAAA AGCAGAGTTA 
TTTGTTTACC CAGAAGCGTA A
 
Protein sequence
MKKALITTVA LAVAALSGCA STSSYEPTAY KTNHSRAYNI AEAGGLVTGI QDASVPRDKL 
ERLTDTKTFG AAYVLSGYMS PQLGMTDWQG GLVNLANWAI GPKQHGARNS LIAWMPANEA 
VSPADAQAKF LSHVKVSIES ALTDLGANFT LLYDKDGRLT YQFYKNEWGC PTWVNGQSKV 
ADMCSVKVKI VEPRLGSAPN FVSGVQGTAY AFTSGHETAY NFVNVGNGAA SHAPQQAIYA 
AISKQLPAWA YLYLAPKSVE LDNGEKVAFP YLLDQGKAEL FVYPEA