| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0099 |
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| Symbol | |
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| ID | 4929410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 86051 |
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| End bp | 86722 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642572398 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001101973 |
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| Protein GI | 134047159 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.319156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTTTG CCCCGGCTTT CCAACCAATT AAAGACGTCG GCACAGGTTC GTTTGTCGCT
GCTGAGGTAC TGGCTCGTTG GTACGACGAA GGCCGGGTTC TTACACCATC CTCTCTGTCA
TCTCCTCCTT ATTGGGGACT GGTGGATATG GAGATGGCAC GGTTCATTCA GGACAACCTT
CATTATTGCT TGGATCTGTA CCCGGCTCTC TTTCTGAATG TCTCCGAACA AACTTTGCAA
TCAGACGTCA TCTTCAAGGC GTGGTGTAGG GTTGTCCGCG ACATTGCTAA AAATCACTCA
TCACGGCTTG TCATCGAGAT TACAGAGGGC ATTCAGGACG CCTCTCTCGC ATCGAGATGG
GAGGCTCTGA CCGAAATAGG GGTTGAGCTG GCGCTGGATG ACTATGGAGA CAAAAACTCT
TCTCTGGATC GCCTGAGCCG TTATGACTGG CACTATTGCA AGTTTGACGC GAGAAGACTG
CGGTCGCTTG AAGACTACCC GGCCATCCTC CACTGCCGCC GAAAAGGCAT ACAGCTCATT
GCTGAGCAGG TGGAGAGCTT CCCATTGGGG GAGAGCGCCA AATTACTTGG ACTGTCATGG
CAACAAGGTT TCTATCACGG GAAGCCTGCT GTCATGGAGA AAAATTTGAA TTACGTAAAG
GCCTTACCAT GA
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| Protein sequence | MIFAPAFQPI KDVGTGSFVA AEVLARWYDE GRVLTPSSLS SPPYWGLVDM EMARFIQDNL
HYCLDLYPAL FLNVSEQTLQ SDVIFKAWCR VVRDIAKNHS SRLVIEITEG IQDASLASRW
EALTEIGVEL ALDDYGDKNS SLDRLSRYDW HYCKFDARRL RSLEDYPAIL HCRRKGIQLI
AEQVESFPLG ESAKLLGLSW QQGFYHGKPA VMEKNLNYVK ALP
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