| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0098 |
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| Symbol | traW |
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| ID | 4929529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 84789 |
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| End bp | 86054 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642572397 |
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| Product | type IV conjugative transfer system protein TraW |
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| Protein accession | YP_001101972 |
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| Protein GI | 134047266 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.122831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGAT CATTGGCCGC GCATATCCCC TGTTCTAAGA GCGTTCTGGT GGCGTTGATG
TTCTCTGTGG CTGGCGGGGC ATACGCTCAA GAGTCTCCGC TCACAGAGCA GGATAAGGCG
CTTATTGAGC AAGGAAAGCA AATTGCCCAA AAGGCCCAGA AGATGGAAAT GCCATCTCTG
TTGCAAAACC AACACATGGA CGAGGCTCAG GCCGAAGCCA AGGCATTTTT CAAGCAGCTC
CAAACTACTA ACCCAACGCT CAAGGAGATG CACCGGAAAC AGGCTGAAAA GGGTATCTAC
TCTGACCATC GGATACTGGT TTTCGCCTCG TTGTCTCTTG GCGAACAGGG GTTAGATGAC
GTCCTAACGG CGGTGTCAGG CCAGCCTGAT TCTGTAATTG TGTTCCGTGG CATCCCGGAA
GGAATGAACT TGGGGCAGGG AGTTAAAGCT ATTCAGGCGC TCGCGGCCAA AAAAGACCCA
GTGCCGAACA TCATCATCAA CCCTACGTTG TTCAAAACGT ACAACATCAC AGCCGTTCCC
ACGATTGTGA TGCTGGAGGA TGAGCCGCTG CCTGGCGAAC AACCAAACGT CGTCGCCCAG
GTCTCCGGGT TGTCCGACCC GGTATGGTTG GCTCGGGAAG TGGATAACGG AGAAAAAGGC
GATCTCGGCG TTAAGGGGCC GGTGGAGAAA ATCAGTGAGC CAGACCTTAT TGATGTTGCC
AAGAAACGCC TTGCCAATAT CGACTGGGAA GAGAAGAAGA AACAGGCTAT AGAGCGCTTC
TGGACCAAGC AGAATTTCAA TGAGCTGCCA AGAGCGCCAA AATCTCGAAC ACGAGAAATT
GACCCTAGCG TCATGATCAC CAGTGACATC AGCACTCCGG ATGGCACTGT GTTCGCTCAC
GCGGGTGACG TGATCAACCC ATTGTGCGAT CCGAAGGAAG TTTGCAAGCC TGGAACGCGG
CCATTTACCC AAGCGGTCGT AGTTTTCGAC CCGCTGGACA AAAAGCAAAT GGAACTACTC
GCCAAGAAGC TGCCTGAAAT CAAGCTGGAG CCTGGCGTAC AACGGATCAC CTATATCGCC
ACAGAGTTCG ACAAAGACAA AGGCTGGGAT TCCTACAAGA GTGTCACCGA CAACTTTGAC
GCGCCGGTAT ATCTGCTGAC GCCAGATCTG ATTACCCGGT TCGAGCTGGA GCACACACCG
AGCGTCATTA CTGCCAGAGG CAAGAAGTTT GTTGTCCGCG AACTTGCTGA GGAGGGCGGT
GAATGA
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| Protein sequence | MIRSLAAHIP CSKSVLVALM FSVAGGAYAQ ESPLTEQDKA LIEQGKQIAQ KAQKMEMPSL
LQNQHMDEAQ AEAKAFFKQL QTTNPTLKEM HRKQAEKGIY SDHRILVFAS LSLGEQGLDD
VLTAVSGQPD SVIVFRGIPE GMNLGQGVKA IQALAAKKDP VPNIIINPTL FKTYNITAVP
TIVMLEDEPL PGEQPNVVAQ VSGLSDPVWL AREVDNGEKG DLGVKGPVEK ISEPDLIDVA
KKRLANIDWE EKKKQAIERF WTKQNFNELP RAPKSRTREI DPSVMITSDI STPDGTVFAH
AGDVINPLCD PKEVCKPGTR PFTQAVVVFD PLDKKQMELL AKKLPEIKLE PGVQRITYIA
TEFDKDKGWD SYKSVTDNFD APVYLLTPDL ITRFELEHTP SVITARGKKF VVRELAEEGG
E
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