Gene SNSL254_pSN254_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0093 
Symbol 
ID4929514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp75181 
End bp80667 
Gene Length5487 bp 
Protein Length1828 aa 
Translation table11 
GC content52% 
IMG OID642572392 
Producthypothetical protein 
Protein accessionYP_001101967 
Protein GI134047272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0406452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATT TCAAGCCTAA AATTCCGGCG ATGCTTGGGG CTCTGGCGGT TCTTACCGCT 
GGTGCTGCTC ATGCAGAGCT GCTGGAATAC ACCTTTAAGG CTCCAGATGG TACGCAACGG
TCTCTGACTC CGAATGCCAA CTATGCCAAC CCAACGGGCA ATATCTCGTT TGCCTTGAGT
GCCGGTATCG ACCGAAAGGT AAAGATTTCG GTGCTTCGGT CGGATGGAAC AGTGGTTTCG
ACAGCGACCA GCCACCTTCT TGGGGCTACT GATCGCATCA CAGTGGGTGG AAAATCCTAC
TATGGTGCGG AACTTCAACT ACCAGCTCCA GTTGGTGGGG CATACACTAT CAGGGCGGAA
ATTCTTGCCT CTGATGGTTC TACAGTACAG ACGGATGAAT ACCCTCTTAC TGTCGATGTG
ACGCCGCCAA CCTACTCTTC GCTTGCCCCG GTTTATAGTA ACTATGGGCA GGTTACTAGC
GGTGATGTTT GGAAACTGGG TCTAGGTGGC TCTGAGGATA ATGCCTTTTT GCTGTCAGGA
ATCTCTGATG AGTCACCCAT CAAAGGCGTC AAAGCAAAGC TGTATCGTCA AGACGGTTCA
CTCTACAAAG ATGTATCCGT GAACTACGAT GACGCTAACG GACAAGCTAG ACAGTCTTTC
CAATCTGGCT TTTTCCCAGC CTCTGACTTG GATGAAGTGT TTACACTTCA GTTTGAGATA
AGCGATAGCG CTGGAAATAG CTATCTTTCA CCTCGTCAAA AAGTGATGTT TGATAGCATA
ACCAATGCTC CGTCTGCACC TTTTGGTGTT TATGACCCTT CAAGTACAAA CAACTTAGGC
CCTGGATTAA CCGGATTTGT TGCTTACACT GAGGGCATGA CAGTTAAAAC TAACCCAATC
AAGTTAGCTT GGCGTGTTCC GCGTGATAAC TGGCATGAGT ATAGAGAAGG TGGGATAAAT
ATGACCAATG CCTTGGGAGA GATGTCCAAG GTAGGAGAAG ATGCCAGCTA TGTTTATCTC
GTCACAACCG CACCTTATGG CAATACCGAC GGCAATTATT GGCGTTGGGT GAACTTCGGC
CAGTGGGGGG GAGGCGGTAT TGCTTATAAC CTCACACTCT CTCCATCAGC GCCTAAAAGT
CCCAGACTTT TGGGTGTGGA CTACAATTAC AGTGATATAG GATGGTCTAG TTTTTACCGC
TACTGGGTGA ACAATTCTGT TCTTCCTGTC ACTGTTAGTA GTATCCGTGT CAAAGTTGAA
CCAAGGCCTT ACGTTCAAAC TGCCGTTCAC AGGGGAAGCT GTGAAATTCC TGTTGGTCAA
GATAGCTGCG TGATTGCAAA TAGCTTCACA ATGGCTAAAG GCACAACAGG GTACGTCCAC
GATAATGCGA CAGTTTTCAA TCCGGATAAA TCTCTTCGCT CGAATCCTCT TTGGGCAGAG
GTTAACTGGA ACGATCAGCA CTACCCTCAG CTAAGTCAGC AGTTCGATCA AAATAGCAAG
GTATTTACCT TATTCGTTAA CCAGCCAGGA CGAGGCGCTT ACTTTGATAG GCTGCGTCTG
CGAAGTGCAT GGATTGAAGA TAGCAAAGGC AACAAGCTGT CTCCAACTGG TGGGTTAATA
GCCAACAACT GGGAGAACTA CACTTACCAG TGGGATCTTA AAACTCTCCC TGAGGGGCAA
TACAGTCTTG TTGCCGCAGC AGAGGAGATG CACGGGCCTT TAACGCGACA ACCAATGTTC
CAGATAACGT CTGATAGAAC GCCACCAACC ATGACACTCA GTGTGGCAGA TGGAGCAGCT
ATCCAGACTC TAGATGATGT TGTTATTACC TTGGCTGATG CTATCGACCC TTCACCTAAA
TTGACCTCTA TTGCCCTTGT AGGGGGGCCT GCCAATGACA AGGTGCAGTT GTCTTGGCGT
GAGGAGTCGA AAGGTCGATT CCGCCTTGAG TACCCGGTAA TGTTCCCTTC TTTGAAGGAA
GGGGAATCTT ACACGCTGAC TGTTTCCGGT GAGGATGCAC AAGGCAATGC GGTTCAAAAG
GCTGTTGGCT TCGAGTACAA ACCTCGTCAG GTAATGCTGG CGGATGGGAT GGATGGCAAG
GTCATGGTCC CCGCTGTCAC TCATGAATTT GTTCATGCAG ATGGCAAACG GATCATCGAA
ACCAAGCCGC TGACGCTCAG TGATGGTGCT GTCGTGACAG GTTCATACGA CGTGTTTGCG
ACCCTACGTT CTGATGCGAA AGTACCGCTG GTGGTTAATG GGGTGCGTAT CGAGCCAGGC
CAGACAATGG GGATCATGAG CCAACATGAT TTCGGTGCGT CAGGTGGTCG TTTGAGCATT
CCGGTTAAAC CTGCTGTTCC TGATGTGGTC GGCTCTTCCA GCCTTCTTGT CATGACCTCC
GCGCCGAACT CACCCATCTT GGTTGTGGAC ATCAATACCT GGAAAGGGAC GGCTAAGCTC
TCTGCTGAAT CATGGACAAT TCGCCAGGTC ATTGACCCAG TGAAAATCTA TGCCCTGCCA
GAGTCGGGTG TGCCTTGCCG GTTCACCACG AAAGAGGATG TGGCTATGGC CGCAGACCCA
ATTCGTGACC CGGTGTGTTT GCTCCAGTGG GACAGAACTC CAGATGAGGC TGAACAAACT
ACGCAGGACA ACAACGGGAT GAAAGTTGCT GGGCTGGTGG GGCAGGCTGT GAGCATTGGT
GAACAACCTG TCGAATACAG CCTGTACCTG TTCAGTGGTG ACGGTTCCAA GGTAAAAGTT
GGGTCTGGCT CTCAGAACCT GACGGTAACT ACTGCCTATG GCTCTGTTGG CTACACCCCG
ATTGATGACA TTGCTCAGGT GAATCGCGTC ATTGAAGATT TTGATGTGAA CTTCAAGCAG
AGCAAGGGGC CAGACTGTTC TATAACCCTC AGCGCAGACC GTGCGAAAAA AGAGGCCGCG
AACAAGGCTG TTGGTAGTGC AAGCCGTGCC TGTCTGTTCG AGTGGCAGCA GATCCCCGAT
GGATTGGTCC AAGACCCGTT ATCGGAATCA CCTTCGCTCT CTGGTTCATT GGCCTCCAAC
GGCGTTCATC CACTGGGGTG GCGGGTAAGT ATTTTCACCC GTAACGGCAC TAGGGTGACG
TTGAACGACG AGACTTTCAA TGTCGAAGCG GTTGACCCAC CAGCTCCGAC CGTTGAACTA
GCCTCCGACT ACAACTTCAA AGACAACATC TACTTGGTGC CGATGACAGG TAACTACCTG
GGTGATGCCA TTATCAACTC TGAACGAGCT GATCTGGATA TTGCCATATC GCGCAACTCG
GATGTTCTTG AGTCTGAGAC CTTCACTCCG GGATGGGGTG CCACCAATAA GGTGTATCGC
CGCATCAATA CCGATGAGCG AGCGTTGTGG GAGGAGACCA CCTACAAGGT GAACGCGGCC
TACAACAAGG TGCCTGATGT GAAGACTGAG GTTGTCTACC GGGCTATCTC TGCACCTTCT
GACAGTATCC GTCCTATCGT TGAAGTTAAA GGTGATACCG CGATTGACAC CCAGGCATTG
CCGGTTAGGG TTCTCATCCG TGATCAGTAC AAACCTGATG GTGACTATGA CGCTAACACG
ATGGGGGTGT GGAAAGTACG CCTGATCCAG CAAAAGGCCT ACAACGAGAC GGTTGCGCTC
ACTGATTATG CGGAAGCATC GAACGGTGAA GCTCAGTTCT CAGTAGACCT GTCTGGTGTG
GATACTTCCT CCGTCCGTAT CGCTGCTGAG GCTGTTCTGG AAAGCCCTGT TGAGGGTTAC
AACCGCACAG AGTTGTCTAT CAGACCTGCC TTCTTGACAG TGCTTCGCGG TGGTGCCATC
GGTGCTGGCG TGGAGGCTCG CAAGTTGTCT GGTGAAGCTC CGTTCACTGC TGTGTTCAAG
CTATCTTTGG ACGACCGTCA GGATCTCCGG GCTACCGGCC AGGTTGTGTG GGAAACCAGT
AAGGACGACG GTAAAACCTG GGAGCAGTTC ATCCCAGAAG ATCGATACAA GTATCAGCTT
GTGAAGACCT TCGACAAGGG GGAGTACCAG GTTCGGGCCA AGGTGGTGAA CGTCAACTCA
GGTGCGGAAA AGTACACCGA AGCGGTCAGT GTTGTCGCTT ACGACAAACC TGATATTGCT
GTTATCGGCC CGACCACGTT GTTTGTCGGA AGTGAAGGCA AGTACACAGC GAACCTGACG
TTGAACGATG AGCCAATCTC CGGTGGCAAT GCCATTGTTG AGTGGTCTAC TGACGGTGGC
AAAACCTACG CGCAGACAGG GGATAGCATC ACGCTTTCGA GCGATGAAGA AACCCGATAC
CGCCTGTGGG CTCGTGTGCG CTCTGCCACG GCACCGGCTG ATGACGGCTA TGCCTATGAA
GTTGCGAAAA CGGCGGTTGA CTTCCGAGCA GTGAAGGCAC CTCGTCCTTA CGTGACAGGG
CCGCGAGTTA TTGAGACCGG TAAGAAGTAT GTGTTCAAAG CCGAAACCAG CCTGCCTTAC
CGTGGGATGG ACGTGAAGCT GAACGGGTTC TTCACGCTGC CTGATGGCTC GATTGTGCAG
GGTGATACTG CTGAGTACGA ACCCTCTGAC ACTGACCTCA ATCAGGCTAC TGTAGAAACG
AAGTACACCA CCTGGATCGA AGGATACCGA GATCAGGGTG CAGAGGCTTC GCATAGCCTA
CGCTCCCGCG TTTGGCAGTA TGTATGGCCG AGCTTCGGAA TGCAGGTTAG GAAGAACGCA
GACGTGGCTC CTGCGACGAT CACCGCGTCA GTGCGGCCAA TTGCCTTCAA CGGCAAGCTG
GAAGAGCCGA CCTACGAGTG GGAGTTGCCG GAAGGCGCTG TGATTCAGGA TCAGCGGCAG
GATATTGTCC GGTCCTTTGT GATCAATGAG CCGGGTGATT ACAACATCAA GGTCACTGTC
CGTGATGCTC GCGGCCATGA GACCGTGATC GAGCAACCGC TCAAGATCGG CCAGGCAGCG
CCCTATGCCA TTGACCTGCA ATACTCTGGC TCGAACAAAT ACGAGCGTGA GCCTCTGGAT
GTGCTGTTGC GACCGTACAT TTCTGGCGGC CACCCACGCG ACCGTATTTC GACTCGTGTT
TATTCGGTAG ATGGTACACC GTTGGAAAGC AGTGGTTACT ACGGCAGAGC AACTCTGGGC
GCTGGTGAGC ACAGCATCAA GCTGAAAATA ACCTCAGAAA TGGGGCATGA AGCTGAGGGC
GAGGTGAACA TCAATGTTGC AGAGAACAAG TTGCCTGCAT GTAGCCTGAG CTCACGAGAG
ACCGTTGGGT CGTGGATCGT CTATGCGAAC TGCGAAGATA CCGATGGCCG CATGAAGTCC
TACGAATGGA CCATTGCCGG TGAGTTGCAG AGCATCAGCT CTGATCGAGT GACTATCAGC
AAGGGCACCT ATGAAACGAT GCCGACCATC TCTCTGGTTG GGGTCGATGA CTCTGGGGGC
AAATCCGAAG CTGTTACCAT GAACTAA
 
Protein sequence
MINFKPKIPA MLGALAVLTA GAAHAELLEY TFKAPDGTQR SLTPNANYAN PTGNISFALS 
AGIDRKVKIS VLRSDGTVVS TATSHLLGAT DRITVGGKSY YGAELQLPAP VGGAYTIRAE
ILASDGSTVQ TDEYPLTVDV TPPTYSSLAP VYSNYGQVTS GDVWKLGLGG SEDNAFLLSG
ISDESPIKGV KAKLYRQDGS LYKDVSVNYD DANGQARQSF QSGFFPASDL DEVFTLQFEI
SDSAGNSYLS PRQKVMFDSI TNAPSAPFGV YDPSSTNNLG PGLTGFVAYT EGMTVKTNPI
KLAWRVPRDN WHEYREGGIN MTNALGEMSK VGEDASYVYL VTTAPYGNTD GNYWRWVNFG
QWGGGGIAYN LTLSPSAPKS PRLLGVDYNY SDIGWSSFYR YWVNNSVLPV TVSSIRVKVE
PRPYVQTAVH RGSCEIPVGQ DSCVIANSFT MAKGTTGYVH DNATVFNPDK SLRSNPLWAE
VNWNDQHYPQ LSQQFDQNSK VFTLFVNQPG RGAYFDRLRL RSAWIEDSKG NKLSPTGGLI
ANNWENYTYQ WDLKTLPEGQ YSLVAAAEEM HGPLTRQPMF QITSDRTPPT MTLSVADGAA
IQTLDDVVIT LADAIDPSPK LTSIALVGGP ANDKVQLSWR EESKGRFRLE YPVMFPSLKE
GESYTLTVSG EDAQGNAVQK AVGFEYKPRQ VMLADGMDGK VMVPAVTHEF VHADGKRIIE
TKPLTLSDGA VVTGSYDVFA TLRSDAKVPL VVNGVRIEPG QTMGIMSQHD FGASGGRLSI
PVKPAVPDVV GSSSLLVMTS APNSPILVVD INTWKGTAKL SAESWTIRQV IDPVKIYALP
ESGVPCRFTT KEDVAMAADP IRDPVCLLQW DRTPDEAEQT TQDNNGMKVA GLVGQAVSIG
EQPVEYSLYL FSGDGSKVKV GSGSQNLTVT TAYGSVGYTP IDDIAQVNRV IEDFDVNFKQ
SKGPDCSITL SADRAKKEAA NKAVGSASRA CLFEWQQIPD GLVQDPLSES PSLSGSLASN
GVHPLGWRVS IFTRNGTRVT LNDETFNVEA VDPPAPTVEL ASDYNFKDNI YLVPMTGNYL
GDAIINSERA DLDIAISRNS DVLESETFTP GWGATNKVYR RINTDERALW EETTYKVNAA
YNKVPDVKTE VVYRAISAPS DSIRPIVEVK GDTAIDTQAL PVRVLIRDQY KPDGDYDANT
MGVWKVRLIQ QKAYNETVAL TDYAEASNGE AQFSVDLSGV DTSSVRIAAE AVLESPVEGY
NRTELSIRPA FLTVLRGGAI GAGVEARKLS GEAPFTAVFK LSLDDRQDLR ATGQVVWETS
KDDGKTWEQF IPEDRYKYQL VKTFDKGEYQ VRAKVVNVNS GAEKYTEAVS VVAYDKPDIA
VIGPTTLFVG SEGKYTANLT LNDEPISGGN AIVEWSTDGG KTYAQTGDSI TLSSDEETRY
RLWARVRSAT APADDGYAYE VAKTAVDFRA VKAPRPYVTG PRVIETGKKY VFKAETSLPY
RGMDVKLNGF FTLPDGSIVQ GDTAEYEPSD TDLNQATVET KYTTWIEGYR DQGAEASHSL
RSRVWQYVWP SFGMQVRKNA DVAPATITAS VRPIAFNGKL EEPTYEWELP EGAVIQDQRQ
DIVRSFVINE PGDYNIKVTV RDARGHETVI EQPLKIGQAA PYAIDLQYSG SNKYEREPLD
VLLRPYISGG HPRDRISTRV YSVDGTPLES SGYYGRATLG AGEHSIKLKI TSEMGHEAEG
EVNINVAENK LPACSLSSRE TVGSWIVYAN CEDTDGRMKS YEWTIAGELQ SISSDRVTIS
KGTYETMPTI SLVGVDDSGG KSEAVTMN