| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0089 |
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| Symbol | ampC |
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| ID | 4929560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 72283 |
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| End bp | 73512 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642572389 |
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| Product | beta-lactamase |
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| Protein accession | YP_001101964 |
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| Protein GI | 134047254 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.0743599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAACAC GGTGCAAATC AAACACACTG ATTGCGTCTG ACGGGCCCGG ACACCTTTTT
GCTTTTAATT ACGGAACTGA TTTCATGATG AAAAAATCGT TATGCTGCGC TCTGCTGCTG
ACAGCCTCTT TCTCCACATT TGCTGCCGCA AAAACAGAAC AACAGATTGC CGATATCGTT
AATCGCACCA TCACCCCGTT GATGCAGGAG CAGGCTATTC CGGGTATGGC CGTTGCCGTT
ATCTACCAGG GAAAACCCTA TTATTTCACC TGGGGTAAAG CCGATATCGC CAATAACCAC
CCAGTCACGC AGCAAACGCT GTTTGAGCTA GGATCGGTTA GTAAGACGTT TAACGGCGTG
TTGGGCGGCG ATGCTATCGC CCGCGGCGAA ATTAAGCTCA GCGATCCGGT CACGAAATAC
TGGCCAGAAC TGACAGGCAA ACAGTGGCAG GGTATCCGCC TGCTGCACTT AGCCACCTAT
ACGGCAGGCG GCCTACCGCT GCAGATCCCC GATGACGTTA GGGATAAAGC CGCATTACTG
CATTTTTATC AAAACTGGCA GCCGCAATGG ACTCCGGGCG CTAAGCGACT TTACGCTAAC
TCCAGCATTG GTCTGTTTGG CGCGCTGGCG GTGAAACCCT CAGGAATGAG TTACGAAGAG
GCAATGACCA GACGCGTCCT GCAACCATTA AAACTGGCGC ATACCTGGAT TACGGTTCCG
CAGAACGAAC AAAAAGATTA TGCCTGGGGC TATCGCGAAG GGAAGCCCGT ACACGTTTCT
CCGGGACAAC TTGACGCCGA AGCCTATGGC GTGAAATCCA GCGTTATTGA TATGGCCCGC
TGGGTTCAGG CCAACATGGA TGCCAGCCAC GTTCAGGAGA AAACGCTCCA GCAGGGCATT
GCGCTTGCGC AGTCTCGCTA CTGGCGTATT GGCGATATGT ACCAGGGATT AGGCTGGGAG
ATGCTGAACT GGCCGCTGAA AGCTGATTCG ATCATCAACG GCAGCGACAG CAAAGTGGCA
TTGGCAGCGC TTCCCGCCGT TGAGGTAAAC CCGCCCGCCC CCGCAGTGAA AGCCTCATGG
GTGCATAAAA CGGGCTCCAC TGGTGGATTT GGCAGCTACG TAGCCTTCGT TCCAGAAAAA
AACCTTGGCA TCGTGATGCT GGCAAACAAA AGCTATCCTA ACCCTGTCCG TGTCGAGGCG
GCCTGGCGCA TTCTTGAAAA GCTGCAATAA
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| Protein sequence | MSTRCKSNTL IASDGPGHLF AFNYGTDFMM KKSLCCALLL TASFSTFAAA KTEQQIADIV
NRTITPLMQE QAIPGMAVAV IYQGKPYYFT WGKADIANNH PVTQQTLFEL GSVSKTFNGV
LGGDAIARGE IKLSDPVTKY WPELTGKQWQ GIRLLHLATY TAGGLPLQIP DDVRDKAALL
HFYQNWQPQW TPGAKRLYAN SSIGLFGALA VKPSGMSYEE AMTRRVLQPL KLAHTWITVP
QNEQKDYAWG YREGKPVHVS PGQLDAEAYG VKSSVIDMAR WVQANMDASH VQEKTLQQGI
ALAQSRYWRI GDMYQGLGWE MLNWPLKADS IINGSDSKVA LAALPAVEVN PPAPAVKASW
VHKTGSTGGF GSYVAFVPEK NLGIVMLANK SYPNPVRVEA AWRILEKLQ
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