Gene SNSL254_pSN254_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0088 
SymbolinsC3 
ID4929533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp70781 
End bp72043 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content34% 
IMG OID642572388 
Producttransposase InsC3 for insertion sequence ISEc9 
Protein accessionYP_001101963 
Protein GI134047113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0568317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA AAATTGATTT CAAAGCTAAG AATCTAACAT CAAATGCAGG TCTTTTTCTG 
CTCCTTGAGA ATGCAAAAAG CAATGGGATT TTTGATTTTA TTGAAAATGA CCTCGTATTT
GATAATGACT CAACAAATAA AATCAAGATG AATCATATAA AGACCATGCT CTGCGGTCAC
TTCATTGGCA TTGATAAGTT AGAACGTCTA AAGCTACTTC AAAATGATCC CCTCGTCAAC
GAGTTTGATA TTTCCGTAAA AGAACCTGAA ACAGTGTCAC GGTTTCTAGG AAACTTCAAC
TTCAAGACAA CCCAAATGTT TAGAGACATT AATTTTAAAG TCTTTAAAAA ACTGCTCACT
AAAAGTAAAT TGACATCCAT TACGATTGAT ATTGATAGTA GTGTAATTAA CGTAGAAGGT
CATCAAGAAG GTGCGTCAAA AGGATATAAT CCTAAGAAAC TGGGAAACCG ATGCTACAAT
ATCCAATTTG CATTTTGCGA CGAATTAAAA GCATATGTTA CCGGATTTGT AAGAAGTGGC
AATACTTACA CTGCAAACGG TGCTGCGGAA ATGATCAAAG AAATTGTTGC TAACATCAAA
TCAGACGATT TAGAAATTTT ATTTCGAATG GATAGTGGCT ACTTTGATGA AAAAATTATC
GAAACGATAG AATCTCTTGG ATGCAAATAT TTAATTAAAG CCAAAAGTTA TTCTACACTC
ACCTCACAAG CAACGAATTC ATCAATTGTA TTCGTTAAAG GAGAAGAAGG TAGAGAAACT
ACAGAACTGT ATACAAAATT AGTTAAATGG GAAAAAGACA GAAGATTTGT CGTATCTCGC
GTACTGAAAC CAGAAAAAGA AAGAGCACAA TTATCACTTT TAGAAGGTTC CGAATACGAC
TACTTTTTCT TTGTAACAAA TACTACCTTG CTTTCTGAAA AAGTAGTTAT ATACTATGAA
AAGCGTGGTA ATGCTGAAAA CTATATCAAA GAAGCCAAAT ACGACATGGC GGTGGGTCAT
CTCTTGCTAA AGTCATTTTG GGCGAATGAA GCCGTGTTTC AAATGATGAT GCTTTCATAT
AACCTATTTT TGTTGTTCAA GTTTGATTCC TTGGACTCTT CAGAATACAG ACAGCAAATA
AAGACCTTTC GTTTGAAGTA TGTATTTCTT GCAGCAAAAA TAATCAAAAC CGCAAGATAT
GTAATCATGA AGTTGTCGGA AAACTATCCG TACAAGGGAG TGTATGAAAA ATGTCTGGTA
TAA
 
Protein sequence
MINKIDFKAK NLTSNAGLFL LLENAKSNGI FDFIENDLVF DNDSTNKIKM NHIKTMLCGH 
FIGIDKLERL KLLQNDPLVN EFDISVKEPE TVSRFLGNFN FKTTQMFRDI NFKVFKKLLT
KSKLTSITID IDSSVINVEG HQEGASKGYN PKKLGNRCYN IQFAFCDELK AYVTGFVRSG
NTYTANGAAE MIKEIVANIK SDDLEILFRM DSGYFDEKII ETIESLGCKY LIKAKSYSTL
TSQATNSSIV FVKGEEGRET TELYTKLVKW EKDRRFVVSR VLKPEKERAQ LSLLEGSEYD
YFFFVTNTTL LSEKVVIYYE KRGNAENYIK EAKYDMAVGH LLLKSFWANE AVFQMMMLSY
NLFLLFKFDS LDSSEYRQQI KTFRLKYVFL AAKIIKTARY VIMKLSENYP YKGVYEKCLV