| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0074 |
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| Symbol | traE |
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| ID | 4929411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 55053 |
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| End bp | 55679 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642572378 |
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| Product | type IV conjugative transfer system protein TraE |
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| Protein accession | YP_001101953 |
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| Protein GI | 134047205 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02761] type IV conjugative transfer system protein TraE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAACCTGA AAAAGTATCT CAAGACCTGG GAAGGGACCC AAACAGAAAA TAAGTGGGGG
CGAATCTTCC AGGGTGGTCT TATTGCTATC GTTTTCCTGC TGGTGGTCCA AGTATTCAGC
AAGGAAACCA TCGTCACTAT CCAGCCTTTC ACGCTCACGG AAGAAGCCTG GGTGACGAAA
AGTAACGCCT CTCAGTCCTA TAAAGAGGCT TGGGGTTTCG CTTTTGCTCA GCTCCTTGGC
AATGTGACGC CAGGAACCGT TGACTTTGTG AAAGAACGGA TCACCCCGCT TCTCTCCCCG
AGCATCTATC AGGACGTGAT TGATGCCATC GAAATTCAAG CTCAACAGAT CAAGAACGAC
CGCGTAACCA TGCGGTTTGA GCCGCGTTTT GTTGAGTACG AGCCCAAGAG CGACAAGGTG
TTTGTCTACG GATATTCCTA CGTCAAAGGG GCTTCTTCTA ACGAAGAGCG TAGCGAACGC
TCCTACGAGT TCGCCATCAA GATTTCAAAC TACGCGCCCG TGCTGGACTA CATCGACACC
TATGTAGGAA AGCCACGCAC CAAAACTGTT TTGGAGCAAC TCCAGCGCAA AGAAGAAAAC
CGGAGAAAGC ATGAAGAACA ACGCTAA
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| Protein sequence | MNLKKYLKTW EGTQTENKWG RIFQGGLIAI VFLLVVQVFS KETIVTIQPF TLTEEAWVTK
SNASQSYKEA WGFAFAQLLG NVTPGTVDFV KERITPLLSP SIYQDVIDAI EIQAQQIKND
RVTMRFEPRF VEYEPKSDKV FVYGYSYVKG ASSNEERSER SYEFAIKISN YAPVLDYIDT
YVGKPRTKTV LEQLQRKEEN RRKHEEQR
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