Gene SNSL254_pSN254_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0059 
Symbol 
ID4929468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp40783 
End bp41439 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content52% 
IMG OID642572363 
Producthypothetical protein 
Protein accessionYP_001101938 
Protein GI134047162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.504093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA TTTACTACGG CGAGGGAACC CATGACGCCG GTTTCGTCGG GTTCCGTGTC 
GCACGAACAG TTGGGGTGGC GGATGATTAC CGGCAGGAAT ACTTCTCCTT GAGAGAGTAT 
TCCTACGCAA CAGCTCACCG GCTGGCCTAC AGCTTGGACC GAAAGTGGGA AGCTGAGGCA 
GAAGAGGTGA AGCGTCAGAA TAAGACTTGT AAGCGGCGAC GCAACTCCGG GCCAAATATC 
ATTGCTGAGG GGCTGAGGGC TTATATCAGT ATCGAGAACC GGAGCCGGAT GGGGGTGAAG 
AGAACCTACT TCGCACCTTG TTTTCTCGTC ACAAAGCCAG GCTACGGCAA TGGGGATATT 
GTTTTCAGGA TTTCCACTCA TGGCTACGCA GAAGCCTACG AAAAGGCGGT GGAAAAATAT 
TGTGAGATCC ATGATTTGAC GGATGAGCAG TATGTTGAGT TGCTTGACCG TATGCCGAGT 
ACAGAGGTGT TCACTGGATA CCTGCTGAAT GCTCTTTTAA TACGCGGTCA TCGCGCCACA 
AAAGCTGAAA TACTGAGTAA GCTGGGGGCT GCGAAGAATG AAGATGACAT CACCAATAGC 
AAAGGGAAAA GCGGCCACAA CAGAGTGCGT TGCCCAGAGT ATCGGTGGGC GCAATAA
 
Protein sequence
MAVIYYGEGT HDAGFVGFRV ARTVGVADDY RQEYFSLREY SYATAHRLAY SLDRKWEAEA 
EEVKRQNKTC KRRRNSGPNI IAEGLRAYIS IENRSRMGVK RTYFAPCFLV TKPGYGNGDI 
VFRISTHGYA EAYEKAVEKY CEIHDLTDEQ YVELLDRMPS TEVFTGYLLN ALLIRGHRAT 
KAEILSKLGA AKNEDDITNS KGKSGHNRVR CPEYRWAQ