Gene SNSL254_pSN254_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0057 
Symbol 
ID4929561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp38852 
End bp39352 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content50% 
IMG OID642572361 
Producthypothetical protein 
Protein accessionYP_001101936 
Protein GI134047256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00944315 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC AGGCATACCC ACCATCAGTC ATTCGTAAAG GCGCTGTGTT GTACGCAGCC 
CTTTATTACA TCTCTGATGA TGATAAAGCA AAGGTCGAGG TTACAGAGTG GATAGTTCGC 
TCTATTCAGA AACGACGCAA CTCAACCAGC GATCAACGCT ATGTCAATCT TGCCCAAAAG 
TTAGATGGGA TTACGTGGGG GAAAAGGTCA CGGAAGAATG GGGACTTTGG TTGGTTGCCA 
TCTATACCGA GCTGGTGCTT GAAGCAGTTC CGGGAAGGTG GCGAATTGCC TTTTGGCGTT 
TATACGACGC GACTGGCCGC TCTCAAGTTT GCGAAAGTCA GCTTGCAGGA AGAGGTCCAA 
TATTGCGAGG CCGAGCTGAA AAAGGCTCAG ACAGAAGAGG ATACTCAGGA ACTCCAAGAG 
GAGCTGGCGG AGAACCAGAG ACTTCTGAAA GCTGCTGGAG CAATGGTGAA GCGCGAGCAA 
AACAAGAAGA AAAGAGGTTG A
 
Protein sequence
MKAQAYPPSV IRKGAVLYAA LYYISDDDKA KVEVTEWIVR SIQKRRNSTS DQRYVNLAQK 
LDGITWGKRS RKNGDFGWLP SIPSWCLKQF REGGELPFGV YTTRLAALKF AKVSLQEEVQ 
YCEAELKKAQ TEEDTQELQE ELAENQRLLK AAGAMVKREQ NKKKRG