Gene SNSL254_pSN254_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0054 
Symbol 
ID4929395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp37353 
End bp38027 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content51% 
IMG OID642572358 
Producthypothetical protein 
Protein accessionYP_001101933 
Protein GI134047148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00333224 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA ACAAGCTCAA CATTGAAACG GTCGATGGGC ACAACGAGCT GGTAGTCAGC 
TTTTTGTCCA GAATGGTAAG CCTGAGTGAC GAGGAAAAGC AGACAGTATT GTCCTGCCTT 
CCGGACACCG GCAAACAAAC AATCACCCAG CTCTATGAGG CGCTGCGTTC TCAAGGGCAC 
CAGGATCTTG CAGAGAAAGT CGAACCATAC CTCCAGCAGG GGGTGTTTGG GCCGATCTTC 
GATAACGCCA AGTCCAAGGT GTTCGTTCGG GACGAAGCGC CTTTTTTCCT CATGGATGAA 
AATCCTTTGA ACTGGGATGA CGCTAAAGCA TTCAATCGCC TACGTATGAG TACGACCTGT 
GTTCTTGGCC GTGGCGGCTG GACTATCGGT GAGCGCTTTG ATGACCGCTT TGATACCGAG 
GTGGGCGGAA CACAGCTTAT CGTCACTCAG TCACTCAACG AAAAAGGTGA GATTGAAGGA 
GGACTTCCTA CCTCGATGTC GCTGAATGAC TTTGCTGAGT TCCCTAAACA GCCAAGGCCT 
CCTCAAATAG TCGATTACCA GGAAGACAAG CGATACACGC TTGAGGAAGC GGAAGCTATC 
CCTGAGCTCG CACCAGTGGT TCAGCGTCTG AAAGAGCGCA TCGAAGAGTA TGAGGAGAGA 
AGAGCCCATG ATTGA
 
Protein sequence
MDENKLNIET VDGHNELVVS FLSRMVSLSD EEKQTVLSCL PDTGKQTITQ LYEALRSQGH 
QDLAEKVEPY LQQGVFGPIF DNAKSKVFVR DEAPFFLMDE NPLNWDDAKA FNRLRMSTTC 
VLGRGGWTIG ERFDDRFDTE VGGTQLIVTQ SLNEKGEIEG GLPTSMSLND FAEFPKQPRP 
PQIVDYQEDK RYTLEEAEAI PELAPVVQRL KERIEEYEER RAHD