Gene SNSL254_pSN254_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0053 
Symbol 
ID4929534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp36727 
End bp37104 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content52% 
IMG OID642572357 
Producthypothetical protein 
Protein accessionYP_001101932 
Protein GI134047210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00179507 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGC AAGCAAATCA TCTCCGTTTG AAGAAACCTT GCGCCAACTG TCCATTCCGG 
AAGGAGGGCG CTATCGAGCT GGCCCCTGGG CGATTAGAAG GCATCATCAA CGACATCGTT 
GAAAACGACA TGACGACGTT TCATTGCCAC AAGACCGTGC ACTCAAAGTC AGGTGGTGAA 
TGGGATGAAG AGGGTAACTA TGCACCTTCG GGACAAGAGT CGATGTGTGC CGGTGCTGCG 
GCTTACTTGA TGAAAATAGG CAGGCCGACA GTGGCTATGC GAATTGCCTT TGCGTTTGGT 
GATGCAAAGG TGTCCGACTG GGACGAAGCT CAAGAGCTGG TTGTCGAGCC TTTGGTACAA 
GGGGACCGAA ATGAGTAA
 
Protein sequence
MPKQANHLRL KKPCANCPFR KEGAIELAPG RLEGIINDIV ENDMTTFHCH KTVHSKSGGE 
WDEEGNYAPS GQESMCAGAA AYLMKIGRPT VAMRIAFAFG DAKVSDWDEA QELVVEPLVQ 
GDRNE