| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0043 |
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| Symbol | tetR |
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| ID | 4929428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 28622 |
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| End bp | 29299 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642572347 |
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| Product | tetracycline repressor protein R, class A |
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| Protein accession | YP_001101922 |
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| Protein GI | 134047255 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTATCA GTGATAAAGT GTCAAGCATG ACAAAGTTGC AGCCGAATAC AGTGATCCGT
GCCGCCCTGG ACCTGTTGAA CGAGGTCGGC GTAGACGGTC TGACGACACG CAAACTGGCG
GAACGGTTGG GGGTTCAGCA GCCGGCGCTT TACTGGCACT TCAGGAACAA GCGGGCGCTG
CTCGACGCAC TGGCCGAAGC CATGCTGGCG GAGAATCATA CGCATTCGGT GCCGAGAGCC
GACGACGACT GGCGCTCATT TCTGATCGGG AATGCCCGCA GCTTCAGGCA GGCGCTGCTC
GCCTACCGCG ATGGCGCGCG CATCCATGCC GGCACGCGAC CGGGCGCACC GCAGATGGAA
ACGGCCGACG CGCAGCTTCG CTTCCTCTGC GAGGCGGGTT TTTCGGCCGG GGACGCCGTC
AATGCGCTGA TGACAATCAG CTACTTCACT GTTGGGGCCG TGCTTGAGGA GCAGGCCGGC
GACAGCGATG CCGGCGAGCG CGGCGGCACC GTTGAACAGG CTCCGCTCTC GCCGCTGTTG
CGGGCCGCGA TAGACGCCTT CGACGAAGCC GGTCCGGACG CAGCGTTCGA GCAGGGACTC
GCGGTGATTG TCGATGGATT GGCGAAAAGG AGGCTCGTTG TCAGGAACGT TGAAGGACCG
AGAAAGGGTG ACGATTGA
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| Protein sequence | MFISDKVSSM TKLQPNTVIR AALDLLNEVG VDGLTTRKLA ERLGVQQPAL YWHFRNKRAL
LDALAEAMLA ENHTHSVPRA DDDWRSFLIG NARSFRQALL AYRDGARIHA GTRPGAPQME
TADAQLRFLC EAGFSAGDAV NALMTISYFT VGAVLEEQAG DSDAGERGGT VEQAPLSPLL
RAAIDAFDEA GPDAAFEQGL AVIVDGLAKR RLVVRNVEGP RKGDD
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