| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0042 |
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| Symbol | tetA |
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| ID | 4929408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | - |
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| Start bp | 27344 |
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| End bp | 28618 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642572346 |
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| Product | tetracycline repressor protein TetA, class A |
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| Protein accession | YP_001101921 |
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| Protein GI | 134047112 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA ACTTATCAGT GATAAAGAAT CCGCGCGTTC AATCGGACCA GCGGAGGCTG
GTCCGGAGGC CAGACGTGAA ACCCAACAGA CCCCTGATCG TAATTCTGAG CACTGTCGCG
CTCGACGCTG TCGGCATCGG CCTGATTATG CCGGTGCTGC CGGGCCTCCT GCGCGATCTG
GTTCACTCGA ACGACGTCAC CGCCCACTAT GGCATTCTGC TGGCGCTGTA TGCGTTGATG
CAATTTGCCT GCGCACCTGT GCTGGGCGCG CTGTCGGATC GTTTCGGGCG GCGGCCGGTC
TTGCTCGTCT CGCTGGCCGG CGCTGCTGTC GACTACGCCA TCATGGCGAC GGCGCCTTTC
CTTTGGGTTC TCTATATCGG GCGGATCGTG GCCGGCATCA CCGGGGCGAC TGGGGCGGTA
GCCGGCGCTT ATATTGCCGA TATCACTGAT GGCGATGAGC GCGCGCGGCA CTTCGGCTTC
ATGAGCGCCT GTTTCGGGTT CGGGATGGTC GCGGGACCTG TGCTCGGTGG GCTGATGGGC
GGTTTCTCCC CCCACGCTCC GTTCTTCGCC GCGGCAGCCT TGAACGGCCT CAATTTCCTG
ACGGGCTGTT TCCTTTTGCC GGAGTCGCAC AAAGGCGAAC GCCGGCCGTT ACGCCGGGAG
GCTCTCAACC CGCTCGCTTC GTTCCGGTGG GCCCGGGGCA TGACCGTCGT CGCCGCCCTG
ATGGCGGTCT TCTTCATCAT GCAACTTGTC GGACAGGTGC CGGCCGCGCT TTGGGTCATT
TTCGGCGAGG ATCGCTTTCA CTGGGACGCG ACCACGATCG GCATTTCGCT TGCCGCATTT
GGCATTCTGC ATTCACTCGC CCAGGCAATG ATCACCGGCC CTGTAGCCGC CCGGCTCGGC
GAAAGGCGGG CACTCATGCT CGGAATGATT GCCGACGGCA CAGGCTACAT CCTGCTTGCC
TTCGCGACAC GGGGATGGAT GGCGTTCCCG ATCATGGTCC TGCTTGCTTC GGGTGGCATC
GGAATGCCGG CGCTGCAAGC AATGTTGTCC AGGCAGGTGG ATGAGGAACG TCAGGGGCAG
CTGCAAGGCT CACTGGCGGC GCTCACCAGC CTGACCTCGA TCGTCGGACC CCTCCTCTTC
ACGGCGATCT ATGCGGCTTC TATAACAACG TGGAACGGGT GGGCATGGAT TGCAGGCGCT
GCCCTCTACT TGCTCTGCCT GCCGGCGCTG CGTCGCGGGC TTTGGAGAAA TTCTTCAAAT
TCCCGTTGCA CATAG
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| Protein sequence | MSTNLSVIKN PRVQSDQRRL VRRPDVKPNR PLIVILSTVA LDAVGIGLIM PVLPGLLRDL
VHSNDVTAHY GILLALYALM QFACAPVLGA LSDRFGRRPV LLVSLAGAAV DYAIMATAPF
LWVLYIGRIV AGITGATGAV AGAYIADITD GDERARHFGF MSACFGFGMV AGPVLGGLMG
GFSPHAPFFA AAALNGLNFL TGCFLLPESH KGERRPLRRE ALNPLASFRW ARGMTVVAAL
MAVFFIMQLV GQVPAALWVI FGEDRFHWDA TTIGISLAAF GILHSLAQAM ITGPVAARLG
ERRALMLGMI ADGTGYILLA FATRGWMAFP IMVLLASGGI GMPALQAMLS RQVDEERQGQ
LQGSLAALTS LTSIVGPLLF TAIYAASITT WNGWAWIAGA ALYLLCLPAL RRGLWRNSSN
SRCT
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