Gene SNSL254_pSN254_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0041 
Symbol 
ID4929504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp26772 
End bp27077 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content58% 
IMG OID642572345 
Producttranscriptional regulator, LysR family protein 
Protein accessionYP_001101920 
Protein GI134047131 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCA CTAACCATCG AAACCTCGTG AATGTCGGTA TCCTGTCTGG CAGGATACCG 
CTCATTTCCC TTGTTCAGTT CATCGCCGTC GCCGAGCATC TGAATTTTCG GCATGCGGCC
AAGGCACTTG GTATCAGCCA GTCGAGCGTC AGCGCGCGTG TGAAAGCGCT GGAGGATAAC
CTTGGTGTCC TGCTATTTGA GCGCCATGCG CGGGGCGTTC GGCTAACAGA CGCAGGCAGG
CACTTCATGG AGCGTGTCAC GGCGGGTGTC GATCAACTCG ATCACGCAGT GAAGACCGCG
GAGTGA
 
Protein sequence
MRRTNHRNLV NVGILSGRIP LISLVQFIAV AEHLNFRHAA KALGISQSSV SARVKALEDN 
LGVLLFERHA RGVRLTDAGR HFMERVTAGV DQLDHAVKTA E