Gene SNSL254_pSN254_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0020 
Symbol 
ID4929503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp12394 
End bp13251 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content52% 
IMG OID642572324 
Producthypothetical protein 
Protein accessionYP_001101899 
Protein GI134047244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0828114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.000175309 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAATTC GTGACTACAT GACAAAGTTG TTTGACGCAT TTGGTGATGT GGAGGAAGTC 
ACCCGAGAAA TGCTTCTGGA GCAGGCGGAG CTCATTCATA CGATCAGCGA TAAGTGTCAG 
AGCACAGGCC TGTTTCTGGA TAGTCAGGTT CGTTTCAACC AGTTCGTTCA AGAGATTGAG 
GCTGACGACA AGGTAGAGGA TCGGTTGCTT CATGCTTGGT GCTGGGTAAT GGACCGAATA 
GTGAAGGCTC CAACATCCTT TCACATGGAT GGGGCTGTGA TTTTGACAAT GCCTCTGGTC 
GCCAGATACC TGCCACCGGT TGAACAGGAG CCGGAAACCA TCGTGGTGAA TCTCGATGAG 
GACTACAAGG CTCCTGTAGG CAACCAAACG CTCTGCGAGC TCGTTATGGA ACGGAGGCAT 
TGGCCGCAAG GTGCAACCTG TGCGACCCAA GAAGCGGACG GGGGAGTCCT CTACTGGGAC 
GCCCCGGTTG ATGTGGTAGA GGAAGGCAGA AAGGTCGCCG GTAAGCACGG CATGATGGCC 
GAGATCGGAT TGAAACATCA GGTTGATGCC TGGTATGCAG ATATGGACGA AACACGGCTC 
GCAACCGATT GGAACACCGC CGTCATTACG CCTCACTGCT TGCTGCTTTC CTATCTGGAT 
GTGCTTCAAA AGAACAAAGT TCCCTTTGAT GAAGGTGTGC AGCTCGCTGC CGAATGGGTG 
AAGCAACTTG GCGGGGAATT TCGTGAAGAC ACTGAGGAAG CGCCGGAAGC TGAGGCTTCA 
GTGCTTTCCC TGGGGAGAGC CACGGCTCAT TGCTTTAAAC CCTATCCGGA CACAAAAAAT 
TTCTATTACG AGGCCTAA
 
Protein sequence
MQIRDYMTKL FDAFGDVEEV TREMLLEQAE LIHTISDKCQ STGLFLDSQV RFNQFVQEIE 
ADDKVEDRLL HAWCWVMDRI VKAPTSFHMD GAVILTMPLV ARYLPPVEQE PETIVVNLDE 
DYKAPVGNQT LCELVMERRH WPQGATCATQ EADGGVLYWD APVDVVEEGR KVAGKHGMMA 
EIGLKHQVDA WYADMDETRL ATDWNTAVIT PHCLLLSYLD VLQKNKVPFD EGVQLAAEWV 
KQLGGEFRED TEEAPEAEAS VLSLGRATAH CFKPYPDTKN FYYEA