Gene SNSL254_pSN254_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0010 
Symbol 
ID4929444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp6867 
End bp7340 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content54% 
IMG OID642572314 
Producthypothetical protein 
Protein accessionYP_001101889 
Protein GI134047086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.109072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00000745334 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCCAGC TTAAACATAA CCGCTTCGTC ATGTTGGGGT CCTTGGTAGC GACGGTCGTA 
GCTGCCGCCA ATGGCTTGAG TTTTCTCACC CTTATGGCTG GTGGAATGAC CCTTCTCCAG 
TTCATGGCTT GGAAGCAACA AGATGCTGTC CGGAGCCGGT TTAAAGCTGC GAAGGATGCG 
TTTGAAGCGT TGAACGTCAT TGCGTTCGAC AAGCACTGGG TAGGTTCAAC CGCGACGGTC 
GCCAAAGTGT CGAACATGAT CACTCCGCCC GAACGACTGG ATAAGCCCTG GGCGGTGCAA 
GTTCTGGCCG TGACCAAAGG TGGGACGTGG TTCGCGGTGG ATCTGCAAGT GACCGGCACT 
GACAAGGTTC AGATGCTTAG CCTCCACCAG CTTAGTGAAA AGGCGGCAAA GACCATGCTG 
GCCTTCGACC TCGAAGTGTA TGAGAAATTT TTCGGAAAAC CTGATGTTGC ATGA
 
Protein sequence
MAQLKHNRFV MLGSLVATVV AAANGLSFLT LMAGGMTLLQ FMAWKQQDAV RSRFKAAKDA 
FEALNVIAFD KHWVGSTATV AKVSNMITPP ERLDKPWAVQ VLAVTKGGTW FAVDLQVTGT 
DKVQMLSLHQ LSEKAAKTML AFDLEVYEKF FGKPDVA