Gene SNSL254_pSN254_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0009 
Symbol 
ID4929371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp6249 
End bp6770 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID642572313 
Producthypothetical protein 
Protein accessionYP_001101888 
Protein GI134047216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0292122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00000914246 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCCAG TTCTCTGGAT ATTCGTCCTG ATCATCGCCC CTTTCGTCAT TGCGAAAGTG 
GACCAATGGC GCAAACGCGG CATTGGAGAC ACCTGGGCGT GGTGGAAATC AGAGAACATG 
CCTTATGAGC TGCGCTCGGC CACTCTGTTT TTGTCCGAAC AGGACATATC AACCACACAG 
CCGGTGCCCA TGCACGGCAG GGTTGATCAG GTGTACCAAA CCAAGAATGG GGTTCTCATT 
CCCTTGGACA CCAAGCTGCG CCAGGTAAAC CACATCTATG AGTCGGACAT TATCCAGCTC 
TCGGTTTACC GGGTAATTCT GTCACACAAG TACAAGGCAC CCGTTGCCAA GTACGGCTAT 
GTCCGAACCG TTGTTGAGAC AGCGGACGGG GATAGAGTCC GTTACATCAA GACAAACCTT 
CTCAGCGAAA AAGAAGTGGT CAAGCTGTGG CACCGCTATC AATCCATCCG TTCTGGTCAG 
GTAAAAACCT CCTGTTCCTG TGGCGGAAAG TTTCACATGT GA
 
Protein sequence
MKPVLWIFVL IIAPFVIAKV DQWRKRGIGD TWAWWKSENM PYELRSATLF LSEQDISTTQ 
PVPMHGRVDQ VYQTKNGVLI PLDTKLRQVN HIYESDIIQL SVYRVILSHK YKAPVAKYGY 
VRTVVETADG DRVRYIKTNL LSEKEVVKLW HRYQSIRSGQ VKTSCSCGGK FHM