Gene SNSL254_pSN254_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0008 
Symbol 
ID4929392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp5725 
End bp6246 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID642572312 
Producthypothetical protein 
Protein accessionYP_001101887 
Protein GI134047200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000897129 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00000814866 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAATTTG ATTACGACAA GTCAGTATCA AACGCACATC TTGAGGCCGC AGGCTGGGGT 
ATGGATGCCT TTAACCACTC CAACCCATTT GAGAGTCATG TCATCTATGT GCGTGACTAC 
CGCAACGATC ACATCCGCCT GTTCACCATC AAGCAGGCTG ACTTCGACAC GATAAAGCTG 
CCGCTTCACC TTACCTCCGA CATGCTGGCT TCGGTGATCG CTGAGTTCGT ATCGAAGGCA 
GCAAAAGGGA AGTTGAATAC GAAGGAGTCC GACACGCTGG CTCCTGCCTT GGTTGGCTAT 
GCCAAATCAA CAGAAACCTA CCGGAGCTGG CGGAGAGTTT CTGGAGCAAC AGAGCGATTG 
CATATGGTCA TCAATATCTA TGCGGGTTCT GAATTGCTGA GACCTTTCAT CGCTCGGGCT 
CCTGAGACCG TCCTGACGAC CCAAGAGCTA CTGGTCTTCT CATCACAGGT TAAGAGCATG 
GATGTATCCA ATCATCCAGA GTGGTTTAGG GGCCGGAGGT AG
 
Protein sequence
MEFDYDKSVS NAHLEAAGWG MDAFNHSNPF ESHVIYVRDY RNDHIRLFTI KQADFDTIKL 
PLHLTSDMLA SVIAEFVSKA AKGKLNTKES DTLAPALVGY AKSTETYRSW RRVSGATERL 
HMVINIYAGS ELLRPFIARA PETVLTTQEL LVFSSQVKSM DVSNHPEWFR GRR