Gene SNSL254_pSN254_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0004 
Symbol 
ID4929482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp2585 
End bp2866 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content43% 
IMG OID642572308 
Producthypothetical protein 
Protein accessionYP_001101883 
Protein GI134047218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0341727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0000015577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGATTTG ATATGTGGGT ACGTTGCACG AAAGCAGGTC CTGAACCTCT CGATATATGG 
GAACTCTGCA CGATTGACGA AGCAGAACAA AGATTGACAG ATCAGGACAA ACCTAAAAAA 
GCAGTCAAAA TGACTCTAAT AGTCCATAAA GTGATCACGC GCACACAAAA AGAGGCCAAA 
AGTTATCCAC ATTTCCTGTG CATAAACGGG GTTTTGGTAT ATGGGAACGC TGCACGATCA 
TATGTGGGTA CGCTGCACGG TGCAAAAAAC GACCAAAATT GA
 
Protein sequence
MRFDMWVRCT KAGPEPLDIW ELCTIDEAEQ RLTDQDKPKK AVKMTLIVHK VITRTQKEAK 
SYPHFLCING VLVYGNAARS YVGTLHGAKN DQN