Gene MmarC5_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1816 
Symbol 
ID4927885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1763481 
End bp1764386 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content37% 
IMG OID640167338 
Producthypothetical protein 
Protein accessionYP_001098327 
Protein GI134046842 
COG category[R] General function prediction only 
COG ID[COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR03280] putative methanogenesis marker protein 11 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT ATGTATCTTA TAAGAAAATT GTGGCAATGG TTGACGAAGA CCTTGGACTT 
ACTGAACTTG TTGAAGAACA CCCCTGTCCA AGCGGTTCAG AATGGCTGAT GTACCAGTAT
CAAAGAACAT CTCCAGTAAT TGTTTCATCA TGGAGAAGTG GAAACAAGCA CCATTTTATT
TTAAAAAATG GAAAAAACGA GCTTAATTTA GTTCCCTCAA TTAGTGCAGC AGGCATTGAG
GAAGTTTACC TACAGAATGG AAAAGTTCAC ATTGTTTACG CAGGTCTTGC AGGTGCAGGT
GTCGGAATTG AACTTAGAAA AAATGCTAAA AATGTTTTAA GCGCTGAATT GATCGAAAAA
GGTGGCGGAT CAAAACTTGG AAGAGGAATG ATCCAGACTC CAAAAATGGA AAAAATAACC
ATCGGAATAG ATGACACCGA TACAAAAGAA GAAGGTGCGA CTTGGGTTTT AGCAAATGAA
GTTGGAAATT TGATCGAAAA ATCCAAAATG GGTTTTTACA TCGACCACAC GATAACTCAG
TTATTCCCCG GAAATCCAAA CAAAACACAA AATTGTGTAT CAATTGCACT CACTTTTGCG
GTTTACCCAG AATACAAGTA TAAAATCGGA AAAGAAATTG AAAAATTACT CAAAGAAAAA
ACACTTTCTG AAAAAACTGC AATTGCAATT TACAGGGGAC TTACTCCTTC ACAAAGCATG
AAATTGTACA CTATGAAAGC TAAACGGGAA ATGGTTCCTA TAAACGAGGC TAAAATGGTT
GCAATGAGAA ACAACATTGA AATTATAGAA GTTACTGGTG ACGGCGGTAT AATTGGTGCA
GTAGCAGCAT TAGGACTTGC AGAATGTCAT AAAACTGCCG CAAAATTGCC GGAAAACTAT
GAATAA
 
Protein sequence
MADYVSYKKI VAMVDEDLGL TELVEEHPCP SGSEWLMYQY QRTSPVIVSS WRSGNKHHFI 
LKNGKNELNL VPSISAAGIE EVYLQNGKVH IVYAGLAGAG VGIELRKNAK NVLSAELIEK
GGGSKLGRGM IQTPKMEKIT IGIDDTDTKE EGATWVLANE VGNLIEKSKM GFYIDHTITQ
LFPGNPNKTQ NCVSIALTFA VYPEYKYKIG KEIEKLLKEK TLSEKTAIAI YRGLTPSQSM
KLYTMKAKRE MVPINEAKMV AMRNNIEIIE VTGDGGIIGA VAALGLAECH KTAAKLPENY
E