Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1816 |
Symbol | |
ID | 4927885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 1763481 |
End bp | 1764386 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640167338 |
Product | hypothetical protein |
Protein accession | YP_001098327 |
Protein GI | 134046842 |
COG category | [R] General function prediction only |
COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
TIGRFAM ID | [TIGR03280] putative methanogenesis marker protein 11 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATT ATGTATCTTA TAAGAAAATT GTGGCAATGG TTGACGAAGA CCTTGGACTT ACTGAACTTG TTGAAGAACA CCCCTGTCCA AGCGGTTCAG AATGGCTGAT GTACCAGTAT CAAAGAACAT CTCCAGTAAT TGTTTCATCA TGGAGAAGTG GAAACAAGCA CCATTTTATT TTAAAAAATG GAAAAAACGA GCTTAATTTA GTTCCCTCAA TTAGTGCAGC AGGCATTGAG GAAGTTTACC TACAGAATGG AAAAGTTCAC ATTGTTTACG CAGGTCTTGC AGGTGCAGGT GTCGGAATTG AACTTAGAAA AAATGCTAAA AATGTTTTAA GCGCTGAATT GATCGAAAAA GGTGGCGGAT CAAAACTTGG AAGAGGAATG ATCCAGACTC CAAAAATGGA AAAAATAACC ATCGGAATAG ATGACACCGA TACAAAAGAA GAAGGTGCGA CTTGGGTTTT AGCAAATGAA GTTGGAAATT TGATCGAAAA ATCCAAAATG GGTTTTTACA TCGACCACAC GATAACTCAG TTATTCCCCG GAAATCCAAA CAAAACACAA AATTGTGTAT CAATTGCACT CACTTTTGCG GTTTACCCAG AATACAAGTA TAAAATCGGA AAAGAAATTG AAAAATTACT CAAAGAAAAA ACACTTTCTG AAAAAACTGC AATTGCAATT TACAGGGGAC TTACTCCTTC ACAAAGCATG AAATTGTACA CTATGAAAGC TAAACGGGAA ATGGTTCCTA TAAACGAGGC TAAAATGGTT GCAATGAGAA ACAACATTGA AATTATAGAA GTTACTGGTG ACGGCGGTAT AATTGGTGCA GTAGCAGCAT TAGGACTTGC AGAATGTCAT AAAACTGCCG CAAAATTGCC GGAAAACTAT GAATAA
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Protein sequence | MADYVSYKKI VAMVDEDLGL TELVEEHPCP SGSEWLMYQY QRTSPVIVSS WRSGNKHHFI LKNGKNELNL VPSISAAGIE EVYLQNGKVH IVYAGLAGAG VGIELRKNAK NVLSAELIEK GGGSKLGRGM IQTPKMEKIT IGIDDTDTKE EGATWVLANE VGNLIEKSKM GFYIDHTITQ LFPGNPNKTQ NCVSIALTFA VYPEYKYKIG KEIEKLLKEK TLSEKTAIAI YRGLTPSQSM KLYTMKAKRE MVPINEAKMV AMRNNIEIIE VTGDGGIIGA VAALGLAECH KTAAKLPENY E
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