| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1786 |
|---|
| Symbol | |
|---|
| ID | 4927911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1737693 |
|---|
| End bp | 1738205 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640167308 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001098297 |
|---|
| Protein GI | 134046812 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTAA AAGGACTTAC AAAAGTGTTT ATTTCTGGTT TTTACGAGAA TCTGGAAAGA
ATAATTCTCG GAAGCGATAG ATACACATCA AAAGAGATGA CGGCAGAGAT TTTAAACGGT
ATTGAACTTC CTAGTTCAGT ATTTTCTGAA CTCTGTATCG GTTGTGGAGG ATGTAAAAAT
GCATGTCCTA CAAAGGCTAT CGAAATGATG CCTGTAGAAC CTGTAAAAAT TACTGAAACC
TATTCCAAAG AAGCAGTTCC AAAAATAGAC TATGATAAAT GTGTATACTG TTTATACTGT
CATGATTTCT GTCCCGTATT TGCCCTATTT AATGAAATAT CTCCAATTCA CCCAAGACAT
GTTGGGGAAG ACTTAGTTCA AGTAGATCTT TCAAAATTAC TGGAAAAACC GATCGAAATT
CCTGAAGAAC AGCTATCAAA GATTGCTAAA ATACTTTCGA TTAACATTTC AGGAATCGTT
AAGCGGGAAA AGAAAGCGAA CTCAAAAGTG TAA
|
|---|
| Protein sequence | MTLKGLTKVF ISGFYENLER IILGSDRYTS KEMTAEILNG IELPSSVFSE LCIGCGGCKN
ACPTKAIEMM PVEPVKITET YSKEAVPKID YDKCVYCLYC HDFCPVFALF NEISPIHPRH
VGEDLVQVDL SKLLEKPIEI PEEQLSKIAK ILSINISGIV KREKKANSKV
|
|---|
| |