Gene MmarC5_1771 details

Gene Information

• Locus tag: MmarC5_1771
• ID: 4927940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 1721771
• End bp: 1722463
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640167293
• Product: hypothetical protein
• Protein accession: YP_001098282
• Protein GI: 134046797
• COG category: [S] Function unknown
• COG ID: [COG2043] Uncharacterized protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTC AAAAAATTAA AGAACTCGGA CAAAAACTTC AAGACTTTTT AGGGCTTGAA 
AAACCTGCAA CAGCAGTTAA ACTTGCAAAA TCAAAAGAAG AAATTCCTGA AGGTTACGCT 
GAAATAGACG CACCCATAAG ACACTGTGAA ATGATCCAAA ATGCAAGAAT CGAAGGTAAA 
AAGTTCTACG CAACAGCAGA AAAACATGCA TGTAAGGGTG GAGCTTACGC AATTGGAATC 
TTACAAAATC CTCCTGAACC ATTAAAAACA GGTGTTTTAT ACCACAATTT AGGAAATTTC 
CCAACTGAAG AAGCTGCAAT CAAAACCGTT GAGGCGATTC CAAGAGTTAA AGAAGAAATT 
TACGCAGGAG TTTATGCACC ATTAAATGAT GCAGACTTTG AACCCGACAG CATTGTAGTT 
TTAGTAACTC CAAAACAGGG TCTAAGACTT ACTCAAGCTT TAAATTACAC AGCAGGCGGT 
AGATTCCAGG CAGATTTCGC AGGAATTCAA TCATTATGTG CTGATGCAGT AGCTGCAGTA 
AAAACAAGAG GTGTAGCAAA CGCAACACTT GGATGCAACG GTTCAAGAGC TTACGCACAC 
GTTAAAGACG ATGAACTCGT GTTTGCATTC CCACTTTCAG ACCTTGAAGA TGTAGTTTCA 
GCACTTGAAT ACTTCAAAGA AAAATGGAAT TAA 

 

Protein sequence

MEIQKIKELG QKLQDFLGLE KPATAVKLAK SKEEIPEGYA EIDAPIRHCE MIQNARIEGK 
KFYATAEKHA CKGGAYAIGI LQNPPEPLKT GVLYHNLGNF PTEEAAIKTV EAIPRVKEEI 
YAGVYAPLND ADFEPDSIVV LVTPKQGLRL TQALNYTAGG RFQADFAGIQ SLCADAVAAV 
KTRGVANATL GCNGSRAYAH VKDDELVFAF PLSDLEDVVS ALEYFKEKWN