Gene MmarC5_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1758 
Symbol 
ID4927964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1709562 
End bp1710344 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content35% 
IMG OID640167280 
ProductNifC-like ABC-type porter 
Protein accessionYP_001098269 
Protein GI134046784 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTAA TTAATTTTAA AAAAATGTCA ATTTTTCTGA CATTTTCATT TACATTTTTA 
CTTTTTTTAT CGATAAGTTC ACTCATTCTA GTTCCGAAGT TTGAAGATGT TTTTGCAGCG
TTATTTCATC CAGAAATGAT CTATTCTCTT AAAGTATCGT TGTATTCCTC ATTACTTTCA
ACAGCATTCG TTTTAGGATT TTCAATTCCT ACAGGCTATG CGATATCTAG ATACTCGTTT
CCAGGAAAAA ATGTAGTAAA AGCAATACTT GATTTACCAA TAGCTTTTCC AGAGCTTGTT
TTAGGGCTTG CACTCTTACT TTTATTCGGT CAGACATTTA TTGGAGACAT TTTAGAATTT
TTTGGAATAA AAGTAGTATT TACCAAACTA GGAATAGTTG TAGCCCAGAT TTTTACAGCA
CTTCCTTATG CGATAAGGAT TGTATGTTCT ACTTTTCAGG ATATTAATCC AAGATATGAA
CTCGTTTCAA GGAGTCTTGG ATACAGCGAG TTTGAAACTT TTAAAAATGT TACCCTCCCA
ATGGCAAGAA GCGGGATTTT TGCTTCATCG ATAATCGCGT TTGCAAGGTG CATGGGTACG
TTTGGAACAG TTTTGATGCT TGCCGGCGGT ACGTACATGT ACACAGAAAC GCTTCCAATA
ACTTTGTACC TAAACATGTC ATATGGGAAC CTCGGGATGG CAATTTCAAG CGGAATTGTG
CTTCTAATGA TATCCTTTAT CGCAATATTG ATATTTGAGA AATACGAAGG AGGGAAATTT
TGA
 
Protein sequence
MQLINFKKMS IFLTFSFTFL LFLSISSLIL VPKFEDVFAA LFHPEMIYSL KVSLYSSLLS 
TAFVLGFSIP TGYAISRYSF PGKNVVKAIL DLPIAFPELV LGLALLLLFG QTFIGDILEF
FGIKVVFTKL GIVVAQIFTA LPYAIRIVCS TFQDINPRYE LVSRSLGYSE FETFKNVTLP
MARSGIFASS IIAFARCMGT FGTVLMLAGG TYMYTETLPI TLYLNMSYGN LGMAISSGIV
LLMISFIAIL IFEKYEGGKF