| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1754 |
|---|
| Symbol | |
|---|
| ID | 4927960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1701134 |
|---|
| End bp | 1704229 |
|---|
| Gene Length | 3096 bp |
|---|
| Protein Length | 1031 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 640167276 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001098265 |
|---|
| Protein GI | 134046780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.847463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAG ATCTACCTCA AAAAGACCTT ATATCACTTT TTGATAAGTT TATAGAATCC
AAAGATTATA AAGAAAGGGC GGAATCTGCA AAAATTTTAG GATACATTGG TGAAGAAGAA
CTTGAAAAAA GGATTCAAAA AATTGTAGTA CTGAATTCTG ACCCAAATAT TGCAGTATTA
TTGAATTTGC TTAGTTCTAT AAAAAATATT ATTTTAAAAT ATCCCAAAAA ATCAGAAAAA
CTTTTAATAC ACGTGTATAT AAATACTGAA TTTTCAAATA ATCTTGTAAA AGAATTTTCA
AGGCAGATTA TTGACTCAAT AAATCCAAAA GTAATAGATA ATATCGTGAC ATACCATACA
TCAAAGTTAT ATTCAAAAAA TAATTTTGAA GTTGTAAGGG CCCTGCTTGT TTTAGGTTTC
GTATCAATAT ACTCCCCAGA ATATCTCAAA AATTCACTTC CGGAACTTTC GATGATTTCA
CTATATTCAA GTTCAGAACT TTCTAGAATA CTTGCTCAAG CGATACTTGA TGAGTTTGAA
AGCATTCCTA AATCGATTAT AAAAGAATTA AAATTTTTGA TAGAATCACC ACATATCGAT
GAAAATAGCC TTGATAAGGA AAATAAATTA TTTAGAAAAC TTGTAATTAT TAATCTCAAA
AAAGAAATTA GTAAAGAAGA GTTATTGTTA ATTTTAAAAC ATTTGGATAA TTTTGAATTC
AAAATAGCAT TTATATCTGC AATTACTGCC AAAAAACATA CTGATTTACT AAAAAAATTA
AATGAATCTA AAAATGAAAT TTTATTAGAT ATTAATTCTT TAATTTTTAA AGTTTTGGAA
TCAAAAACTG AAATTGATAG TTTAAACGCA ATTTTAAATT CTTCATACGT AAAAATACTT
ATAAGTTCAA ACGTTACCCA TGAAAAAGCT TTAAAACTTA TTAAAAATGT ATCTAATGAT
TATTTAAGAC ATGAAAACTA TTTAATCAGT AATTATGGAT TAGAAATTCT AAATTCGTTT
GTTTTAATGA ATTATAAAGA ATTGAATATG AATATTGAAG AAATTCTAGA ATCTAAAAAT
ATTTGCGAAA TTTTTAGAAA AAACAATATC AATTATTATT CGGGCGTTAA ATTACTGGCA
AATCTCGAAC GATACGACCT ATTGGGTCCT GAAAAAAGTC CTTATTTTAA TGAAAATGCC
ATAAATACCT ATGAAGAAAT TCCAAAAAGC ATGATTCATG AAAAATTTAA AAATCTTGAA
AAAGAATTTG AAAGTGATGA CTGGCTTTAT CGATACGAAA TCGGAAAAAA AGTTGGAAAT
CTATCCTATG CAATCCCTAA AGGAATCAAA TACAATTATA AACTTATTGA TATGCTTTTA
AATGATAATA CATTTCTTGT TAGGTCCGTG GGCGTCTGGA TATTACAAAT TAGTTTAGAA
AGAAATATTA AAATTCCAAA AGAATTACTT ATTAAATCCA TTTCCTACTT TGATGACCCC
AATATGGAAG TACGGCAGGA TTATTCCATT TTTTACAACA TACTTGTTAA AAAATATGCT
GAAATATTAG GAGATACCGA ATTGAAATTC AAATTACAAT CTGCACTCAT GACCAAATAT
TTCACGGATA AATTTATGAT AATAAGAAAC ATCTGTGAAA ATACTTTAAA ATTATTTCCC
AATTCAGAAT ATCTAATGAA TTATGAAGAT AAACCATTAA AAGCGAAATT TAAAACTCTT
GAAAATACAA TTAACCACCC GGAACTTAAA AAATCTGCCA TAATTCGAAT TAAAGTTAAA
TTAAGAAGTT ATATTAATTC TAAAGATTAT GAACATATTC AAAAAATCCT TGGATTTATT
GAAAAACAGG ACATTACCGA AGAATATTTC CATATATTTT CAGAATTGCT AAGGATTAAA
AACGAATTTG ATACTGCAAA TTCCATTTTG ACCACTTTAA AAAATAAATT TAAAAAAGTT
CCAAACTCGC GTGAAAATAT TCTTTATGGA AATTTAAATG AACTAATTGT TTCAAGACGA
ATTGATTCTT TAAATGAAAT TTTTGGATAT ATTGAAGAAG ATTTTGAATT AAGCGGAAAA
ATCACTGAAA AAGTAAAAGA ATTTGTTATA TACCCACAAG TAAACCCTAA AATAACAGAA
ATATCTTTAA AAATACTTAA CAATCTTAAA AAAGAGGAAT CTACAAAATT AGTAGCTGAA
AAACTTGAAC TTGAAGAATA TTTATCTAAA AACCATGCTG AATCAGAAAT TGTTGATGTT
AAAAATCAAA CGTGGAAAGA GATATATTTC TCATTAAAAT ATCTGTTAAC CCAAGATTAC
AAAACCCTAA ATTATGTAAA TCTTGAATTT TCAGATTTTA TAAAGTTCAA TATCCTAAAA
TCAAATAAAA ATTCCTTAAT GATTACGACA ATACTATTGG ATGTCTTAAA AACCAATGTA
AAATCAGAAG ACACCAAATT ATTAAATGAA ATCGAAAATA ATAAAGAATA TATCCTTAAA
AACATTTCAG AAATTATTTT TAACAGACAA TATCCATTAC TGGCATACAA AGGCCTTGAA
TTATTGAAAA CAATAATGTC TAAAAAAACA TTCTGGTTTG AAGAAGCAGT TTTAAAATCC
AAAAATTTTG AAGAATATTT AATACTTGTT TCAAAACTTC TTGATGAAGA TTCATCCCAA
ATACAGGTTG AAAGTTTAGA AACTCTTGCA AGTATGATCA AATTAAATAT TAAATGCACA
GATTACCCCG AAATTCATGA AAAAGTTCTG AATTTAATAA GCAATGATGA AAAATGGATA
ATCTTTAGAA AAGCTCTTGA TGTAGTATAT GCCTGCAATT TTGAAGATAA CGAAGAAATC
CTTGAAAAAG TAAGTAAAAG AATTATAGAC TACCTTAAAA GTTCCCAGGA CGATTCTAAA
CTATTTTTAA TAAAATTCTT TAAAATAAAA GGAATAAATA AAATCCCAGA TTACTTATTT
GACGAATTAA AAGAATTTGA AAATAGTCCG AACCCATATG TGAGTTCTGA AATAGCAGAA
TTGATTCATA AAAGAAAAGG GATTATAAAT CAATAA
|
|---|
| Protein sequence | MYQDLPQKDL ISLFDKFIES KDYKERAESA KILGYIGEEE LEKRIQKIVV LNSDPNIAVL
LNLLSSIKNI ILKYPKKSEK LLIHVYINTE FSNNLVKEFS RQIIDSINPK VIDNIVTYHT
SKLYSKNNFE VVRALLVLGF VSIYSPEYLK NSLPELSMIS LYSSSELSRI LAQAILDEFE
SIPKSIIKEL KFLIESPHID ENSLDKENKL FRKLVIINLK KEISKEELLL ILKHLDNFEF
KIAFISAITA KKHTDLLKKL NESKNEILLD INSLIFKVLE SKTEIDSLNA ILNSSYVKIL
ISSNVTHEKA LKLIKNVSND YLRHENYLIS NYGLEILNSF VLMNYKELNM NIEEILESKN
ICEIFRKNNI NYYSGVKLLA NLERYDLLGP EKSPYFNENA INTYEEIPKS MIHEKFKNLE
KEFESDDWLY RYEIGKKVGN LSYAIPKGIK YNYKLIDMLL NDNTFLVRSV GVWILQISLE
RNIKIPKELL IKSISYFDDP NMEVRQDYSI FYNILVKKYA EILGDTELKF KLQSALMTKY
FTDKFMIIRN ICENTLKLFP NSEYLMNYED KPLKAKFKTL ENTINHPELK KSAIIRIKVK
LRSYINSKDY EHIQKILGFI EKQDITEEYF HIFSELLRIK NEFDTANSIL TTLKNKFKKV
PNSRENILYG NLNELIVSRR IDSLNEIFGY IEEDFELSGK ITEKVKEFVI YPQVNPKITE
ISLKILNNLK KEESTKLVAE KLELEEYLSK NHAESEIVDV KNQTWKEIYF SLKYLLTQDY
KTLNYVNLEF SDFIKFNILK SNKNSLMITT ILLDVLKTNV KSEDTKLLNE IENNKEYILK
NISEIIFNRQ YPLLAYKGLE LLKTIMSKKT FWFEEAVLKS KNFEEYLILV SKLLDEDSSQ
IQVESLETLA SMIKLNIKCT DYPEIHEKVL NLISNDEKWI IFRKALDVVY ACNFEDNEEI
LEKVSKRIID YLKSSQDDSK LFLIKFFKIK GINKIPDYLF DELKEFENSP NPYVSSEIAE
LIHKRKGIIN Q
|
|---|
| |