Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1744 |
Symbol | |
ID | 4927979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1693007 |
End bp | 1693903 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640167260 |
Product | hypothetical protein |
Protein accession | YP_001098255 |
Protein GI | 134046770 |
COG category | [S] Function unknown |
COG ID | [COG4071] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.493777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGATAG TTTTAACTCG TGAAAAAATG GAAATAACTG CGACACCGAT AAGAACCAGA TATATCGATA GAAACGAAGA CTTTGTATCA GAATCCATAA ATTCTTTGAA AAAAGAAATA AAACAAGGAT TTGAAATAAA AAACGGGGAT TTTTTAGTAG TCAGCGAAAA ATTCATAGCT ACAAGTGAGA ATAACTTTGT AGATGAAAGT TTGGCTGACC CCAAATTCTG GGCATATTTT ACATATTATC TATCAAAATA CGGCTGGGGA TATATTTTAG GCCCTCTTTT AGGAACTAGG GGAGATAGGG TTAAAAATTT AAGAAAAATG CCAAAAAAGG AAACACTAAA ACACAAACAA ATTGTAATTG AAAATTTAGG ATTGATATAC GCACTAAAAC CTGCGTCAGA AGGCGGAATC GATTTAACAA ACGTCCCTGG AACTTATGCT TCATTACTTC CAGAAAATCC AGAACATTCT GCAAAAAAAC TCCATAAAAA AATAAAAGAA GAACTGAACC TCGATTTAAC AGTTATGGTA ATCGACACAG ATGCGACATA CAGATTTTTT AACTGGTATG TTACAGCACT TCCAATTGCA ATTGATGGAA TAATCTCAAA AATAGGTGTT TTAGGGTACC TTTTGGGAAA ATTTGGAAAA AGATTAAATC AAGGGGGACT CTGTGGCGCA ACCCCGCTTG CAATCGTTGG AAATGAAAAT TACAAAAAAT ATCATTTAAA AACGCTTCTT TATATCGCAA ATCTGTCCGA TACATCCCAA GTTCCATATA CTAAATCAAT TCACGATTTG ATGAAAAAAT ACAACACCTT TGAAATAACT GTCGATGTTT TAAAAGAAAT GGAACACAGC CCGCTAGTTG TTGTAAAATG TGAATAA
|
Protein sequence | MEIVLTREKM EITATPIRTR YIDRNEDFVS ESINSLKKEI KQGFEIKNGD FLVVSEKFIA TSENNFVDES LADPKFWAYF TYYLSKYGWG YILGPLLGTR GDRVKNLRKM PKKETLKHKQ IVIENLGLIY ALKPASEGGI DLTNVPGTYA SLLPENPEHS AKKLHKKIKE ELNLDLTVMV IDTDATYRFF NWYVTALPIA IDGIISKIGV LGYLLGKFGK RLNQGGLCGA TPLAIVGNEN YKKYHLKTLL YIANLSDTSQ VPYTKSIHDL MKKYNTFEIT VDVLKEMEHS PLVVVKCE
|
| |