Gene MmarC5_1741 details

Gene Information

• Locus tag: MmarC5_1741
• ID: 4927996
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: -
• Start bp: 1689397
• End bp: 1690044
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640167257
• Product: flagellin
• Protein accession: YP_001098252
• Protein GI: 134046767
• COG category: [N] Cell motility
• COG ID: [COG1681] Archaeal flagellins
• TIGRFAM ID: [TIGR02537] archaeal flagellin N-terminal-like domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA CAGAATTTAT GAAAAACAAA AAAGGTGCTT CCGGAATTGG TACCTTGATT 
GTTTTTATTG CAATGGTATT AGTTGCTGCA GTTGCAGCAA GCGTTTTAAT TAACACTAGC 
GGATTCTTGC AACAAAAAGC TTCAACAACC GGTAAAGAAA GTACCGAACA AGTTGCAAGT 
GGATTACAAG TAGTTGGAGT TACAGGTAAA AAATCAGCTC TTGGTAACCA AGACATTGAA 
CTTTTAGCAA TATACGTAAC ACCTAGCGCA GGAAGTTCTG CAATTGATTT AACTCAGACA 
AAATTATTCT TAGAATACAA CGGATACAGT TGTTCATTAA ACTACTCAAG TAAATTAAAC 
TTAACTGCTG GAAACGCAAA CGTATTCGGT AACGTTGGAA ACGCAGATAA CACATCATTC 
ATGATTGCAT CATTACAAGA TGCTGATGAT TCAGTAAGTG ACAGCGCAGT TATAAACAAA 
GGAGATACTG TTGCATTCCT CGTGAACGCA AGTGCTGCAT TTGCAACAAC TCAAATACCT 
GAAAGAAAAG TTATTTCTGG AAAAATTATC CCTGAATTTG GTGCTCCAGG AATTATTTCA 
TTCACAACCC CTGCGTCATA CACTGACACA ATTATCGAAT TACAATAA 

 

Protein sequence

MKITEFMKNK KGASGIGTLI VFIAMVLVAA VAASVLINTS GFLQQKASTT GKESTEQVAS 
GLQVVGVTGK KSALGNQDIE LLAIYVTPSA GSSAIDLTQT KLFLEYNGYS CSLNYSSKLN 
LTAGNANVFG NVGNADNTSF MIASLQDADD SVSDSAVINK GDTVAFLVNA SAAFATTQIP 
ERKVISGKII PEFGAPGIIS FTTPASYTDT IIELQ