| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1727 |
|---|
| Symbol | |
|---|
| ID | 4928013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1677086 |
|---|
| End bp | 1678885 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640167243 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_001098238 |
|---|
| Protein GI | 134046753 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.20079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TTATCGGATA TATCGGAAAT GAAAGGGCTT CGAAGATACT ATTGAATGGT
TTAAAAAGGC TAGAATATAG GGGATATGAT AGCTGCGGAA TTGCGACTAT TGATGATACG
ATTAAACTTA AAAAAAATAC AGGAAAAGTT CTAGAAGTTT CCAAAAAAGA AAATTTTAAT
GAAATGACTG GATTTATTGG TATAGGACAT AGCAGGTGGG CGACACATGG TGGAATCACA
AAAAATAATG CACATCCCCA CCATGATTGT AGCGAAAAAA TCTGCGTTGC GCACAATGGA
ATCATTTCAA ATTATCGCGA ATTAAAAGAA TTTTTAATTT CAAAAGGCCA CTTTTTCAGA
TCTGAAACAG ATACTGAGGT TATCCCGCAC TTAATTGAAG AAGAACTGAA AAATTTTGAA
GAATTAACTG AAAATAACTA CATTGATGCA ATTAAAAATG CAATTGGAAA ACTTAAAGGA
ACTTATGCAC TTTTAATTTT AAATCAGACT TTTCCGAAAA CATTGATTGG AGTTAGGAAC
GAAAGTCCGC TAATTTTAGG GATAAAAAAT GATGAATGCT TTATTGGAAG CGATATTTCG
GCATTTTTAG AATATACTAA ACTTGCAATG CCACTAAATG ATCGCGATAT TGTAATTTTA
AGAAAAGAAG ACGAAAAAAT AGATATTGAA GTCTTAAATG ATGGAAAAAA GGTTGAAAGA
GATACCATTG AACTTCAGTG GGACATGGAA AGTGCTGAAA AGGAAGGTTA CGACCACTTC
ATGTTAAAAG AAATTATGGA AGAACCCGTA ATTTTAAAAA ATTCGATGAA AATTTCAAAA
CCTGAAATTG AAAAACTTGC AAGTGAAATT GAAAAATGTG ATAAAATATA CATCACCGCA
ATGGGCACTT CACTTCATGC TGCAATGGTT GCGGAATACT GGTTCTCAGG ATTAAATAAA
TTAGTTATTC CACTCGATTC GTCTGAATTT TTAATAAAGG GAATTGTTGA TGAGAAAACT
TTGGTTATTG GGATAACCCA AAGCGGTGAA ACATACGACA CCATGAAAGC AATCAAATAC
GCTAAAGAAA AGGGTGCAAA AACTGCAACC ATAGTAAACG TACTTGGAAG TACTGCAACA
AGAGAAGCAG ACATCACAAT AATGATGGGT TCGGGCCTAG AAATTGCAGT TTGCGCAACA
AAAACATTCA TGTCACAGCT TGTTATTTTA TACCGGTTAT TCATTGAATA TGGTAAAATT
ATCGGAAAAA ATATGGATAT TTTTGAAAAA GAATTACTAA ATATTCCGAA TTATATTTCA
AAAGTTTTGG ATGAAAAAGA AAATATCTCA AAAATTGCAA AAGAATTAAC CGCTAAAAAC
TATCTTTTTA TTTCAAAAGG GATTAATCTT GCAAATGCCC TTGAAGGGGC TTTGAAATTC
AAAGAAATAA CCTATTTACA TGCTGAAGGA ATGAGCAGCG GATTTTTAAA ACACGGAACT
ATTTCTTTGA TTGATGAAAA TATGGATACT GTTGCACTAA TCCCACCTTC AAAATCTGAA
CTTTTAAGTT CCGTTCTTTC AAATGTGGAA GAAATAAAAG CAAGGAATGG CAAAATCATC
GGAATTTCAC CGGTTGAAGA CAATTTAAAA TATTCAATAA AAGTTCCAGA TGTAATTGAA
GAGGTAAGTC CTTTTGTTTA CGCACCAGCT TGCCAACTTT TAGCATACTA CAAAGCCGTT
GAATTAAAAA GAGATGTGGA TAAGCCACGA GGGCTTGCAA AAAGTGTTAC AGTTGAGTAA
|
|---|
| Protein sequence | MCGIIGYIGN ERASKILLNG LKRLEYRGYD SCGIATIDDT IKLKKNTGKV LEVSKKENFN
EMTGFIGIGH SRWATHGGIT KNNAHPHHDC SEKICVAHNG IISNYRELKE FLISKGHFFR
SETDTEVIPH LIEEELKNFE ELTENNYIDA IKNAIGKLKG TYALLILNQT FPKTLIGVRN
ESPLILGIKN DECFIGSDIS AFLEYTKLAM PLNDRDIVIL RKEDEKIDIE VLNDGKKVER
DTIELQWDME SAEKEGYDHF MLKEIMEEPV ILKNSMKISK PEIEKLASEI EKCDKIYITA
MGTSLHAAMV AEYWFSGLNK LVIPLDSSEF LIKGIVDEKT LVIGITQSGE TYDTMKAIKY
AKEKGAKTAT IVNVLGSTAT READITIMMG SGLEIAVCAT KTFMSQLVIL YRLFIEYGKI
IGKNMDIFEK ELLNIPNYIS KVLDEKENIS KIAKELTAKN YLFISKGINL ANALEGALKF
KEITYLHAEG MSSGFLKHGT ISLIDENMDT VALIPPSKSE LLSSVLSNVE EIKARNGKII
GISPVEDNLK YSIKVPDVIE EVSPFVYAPA CQLLAYYKAV ELKRDVDKPR GLAKSVTVE
|
|---|
| |