| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1709 |
|---|
| Symbol | |
|---|
| ID | 4928039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1660717 |
|---|
| End bp | 1662693 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640167225 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001098220 |
|---|
| Protein GI | 134046735 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACC CCAAAGTGGG TGTATTCGTC TGCTACTGTG GTGCAAACAT CAATGGTGCA
GTGGATTGTG AAGCCGTAAA GGATTTCGCT TCTAAATTAG ATGGTGTAGA AGTTGCAGCA
ACCTACCCGT TCATGTGTGC TGACCCAGGT CAAGGTCTTA TCAAAGACGC GATCAAAGAG
CACGGATTGG ACAGGATAGT TGTTGGAGCA TGCACTCCTA AGATCCACGA GCCAACCTTT
AGAGGTTGCC TACAGGATGC GGGAATATCC CCGTACTACC TAGAGTTTGT AAATATTAGA
GAACACGACG CATTTGTCCA CATGGGCGAT GTAGAAGCAG CAACCAAAAA AGCATGTGAA
ATGATTGCTG GTGGAGTCGA ACGAGCTAAG AAATTAGAAG ACGTTCCTCA AAAAGTCGTA
GATGTAGATA AAAGCTGTAT GGTTATCGGT GCAGGTATTG CAGGTATTCA ATCTGCTCTT
GACCTCGGTG ACCAAGGATT CAAAGTCTAC CTTGTAGACC GAGACGAGTC AATCGGAGGA
AGGATGGCGC AACTTGCAAA GACTTTCCCG ACAGACGACT GTGCAATGTG AATTCTCGCA
CCAAAAATGG TGTCAGCAGC TAACCACCCT AACATTGAAT TAATTACATT TGCTGAGATT
AAAAATATCG ACGGTTACAT CGGAAACTTC GATGTTACAC TCGAGAAAAA ACCAAGATAT
GTTGACGAAG ACATATGTAC CGGATGTGGT GCATGTGCAG CAGCATGTCC AATTGAGGTG
CCTAATGAGT TTGATTTAGG ATTAGGTACT AGGAAAGCAA TTTATGTTCC ATTCCCACAA
GCAGTTCCAT TACTTTACAC AATCGATAAA GAACACTGTA TTGATTGTGG ACTTTGTGCA
AAAGTTTGCT GTGCAGAGGC AGTAAGATAC GATCAGAAAC CTCAAGAACT CAAAATCAAT
GTTGGTACAA TTATTACCGC AACAGGATAT GATGAGTTCG ATGCAAGCAG AAAAGAAGAG
TATGGATACG GAGTTTACGA CAACGTAATT ACAACTCTCG AAGTTGAAAG GATGATTAAC
CCTGCTGGTC CAACCCACGG GCACGAAATT AGGCCTAGCG ACGGAAAAGC ACCAAAAAGA
ACTGTATATA TACAGTGCGT TGGTTCAAGA GACGAGAAAG TTGGAAACCC ATACTGTTCA
AGAGTATGCT GTATGTTCGC ATTGAAAAAT GCGCAGTTAA TGAAAATGCA CGACCCTAAT
GCAGAAGTTT ACATCTGCTA CATGGATATC AGGGCTTTTG GTAAAGGGTA CGAAGAGTAC
TACAAGAGAG CTCAGGACCA GTTCGGAGTT AAATTCATTA GGGGAAGACC TGCTAACATT
ATCGAAGATC CAGAAACTAA AAACTTGACC GTGAGAGTTG AAGACACCCT CATGGGAGAA
ATTTTAGAGA TCGACGCTGA TTTAGTAGTT CTTTCAGCAG GTTTGGAAGC TAAAAAAGAT
GCCGGAGAAC TCGCTAAGAT GCTCGGTATC GATAGAGGTC CAGAAGGATT CTTTAAAGAA
TTACACCCTA AATTAGCACC AGTTAACACA AAAGTTGACG GTGTTGCAAT TGCAGGGGTC
GCTCAAGGAC CAAAAGATAT TCCAGATACT GTAGCACAAG CAAAAGGTGC TGCAAGTGCT
GTTGCAATTC CAATGTCACA AGGTCAGTTC AAGATCGAAA TGATTAGGGC AACAGTTAAC
GAGGAAGTAT GTGGTGGCTG TAAAGTATGT GCTTTAATGT GCCCATACAA TGCTATTACC
TACGAAGAAA AAGACGGTCA CTTGGTGGCA GTAACTGATG ACGTTGCATG TAAAGGATGT
GGTTCATGTG CAGCAGCATG TCCAAGTGGT GCAATGCAGT TAAGATACTA CCGAGATGAA
CAGGTCATCG GAATGATTGA CGGTATTTTA AATGCCGCAA AAATGTTGGA AGAATAA
|
|---|
| Protein sequence | MSDPKVGVFV CYCGANINGA VDCEAVKDFA SKLDGVEVAA TYPFMCADPG QGLIKDAIKE
HGLDRIVVGA CTPKIHEPTF RGCLQDAGIS PYYLEFVNIR EHDAFVHMGD VEAATKKACE
MIAGGVERAK KLEDVPQKVV DVDKSCMVIG AGIAGIQSAL DLGDQGFKVY LVDRDESIGG
RMAQLAKTFP TDDCAMUILA PKMVSAANHP NIELITFAEI KNIDGYIGNF DVTLEKKPRY
VDEDICTGCG ACAAACPIEV PNEFDLGLGT RKAIYVPFPQ AVPLLYTIDK EHCIDCGLCA
KVCCAEAVRY DQKPQELKIN VGTIITATGY DEFDASRKEE YGYGVYDNVI TTLEVERMIN
PAGPTHGHEI RPSDGKAPKR TVYIQCVGSR DEKVGNPYCS RVCCMFALKN AQLMKMHDPN
AEVYICYMDI RAFGKGYEEY YKRAQDQFGV KFIRGRPANI IEDPETKNLT VRVEDTLMGE
ILEIDADLVV LSAGLEAKKD AGELAKMLGI DRGPEGFFKE LHPKLAPVNT KVDGVAIAGV
AQGPKDIPDT VAQAKGAASA VAIPMSQGQF KIEMIRATVN EEVCGGCKVC ALMCPYNAIT
YEEKDGHLVA VTDDVACKGC GSCAAACPSG AMQLRYYRDE QVIGMIDGIL NAAKMLEE
|
|---|
| |