| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1706 |
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| Symbol | |
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| ID | 4928060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1657350 |
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| End bp | 1658951 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640167222 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001098217 |
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| Protein GI | 134046732 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCC TTCTTCTAAA CGTGATTGTG TTAATCTATT TGTTAGTTAT TGGATACCTT
GGATACAAAG GTTGGAAAGG AACTTCAAGT GCTGAAGATT ACATGGTTGG AGGTAGAAAA
ATCCATCCAT TTGTTATGGC AATGAGTTAC GGTGCTACAT TTATCAGTAC TGCTGCAATT
GTTGGTTTTG GTGGATTCTC GGGCCTATTT GGTATGAGTT TGCTCTGGCT GACGTTTCTA
AATATCTTTT TAGGTATCTT TATAGCATTT GTATTTTTCG GGAAAAGAAC CCGAAAAATG
GGCCATAACT TAAATGCGCT TACATTTCCG GAGCTTCTGG CAAAACGATT TGAAAGTAAA
TTTATACAGT GGTTTTCGGG CCTTTTGATA TTCTGTGCAA TGCCGATTTA TGCGGCAGCA
GTTTTGATTG GTGCTGCAAG GTTTATAGAA ACCACACTTA GCATCTCATT TGACGTTGCA
CTGCTTGTAT TTTCAGTAAT TATTGCAGTA TACGTTGTAA TGGGCGGTTT AAAAGGTGTG
ATGTACACAG ATGCATTTCA GGGAACAATC ATGTTTTTTG GAATGTTATT TTTGCTCTAC
ATGACCTACG ATATACTTGG CGGGGTTACT ACAGCTCACC AGGCAATTTC AAATATGTCA
GGGTTAGTTC CAGCAAACCT TGCTAGTATG GGGCATGCTG GGTGGACTTC GATGCCGACA
TTTGGTTCTC CAATGTGGTG GACAATCGTT TCGAGCATAA TTTTGGGTGT TGGAATCGGA
GTTTTAGCAC AACCTCAGCT CATTGTTAGA TTTATGACTG TAAAAAGTAA CAGGGAATTA
AATAGGGCTG TTTTAATTGG TGCAGTCTTC ATTTTAATTG CTACAGGTAC CGCATACGTT
GTAGGAACCC TTTCAAACGT GTACTTCATG AATACCGAAG GAATTCTCTC AATTGGTGCA
ACCGTGTCAG ATGCATTCCC AACTGGAAAC AGTGACAGTA TCATGCCATT ATATATCAAC
AAAGCGATGC CAGAATGGTT TATTTACATA TTCTTGGTTT CGTTACTTGC AGCTGCAATG
TCGACCATTT CAAGCCAATT CCACGCCCAG GGTACGTCGA TTGGAAGGGA CGTTTATGAA
ACATTGTGTG GTAAAAAAGG ATTGAATTCG GTAATTATCA CAAGATTTGG AATCATTGTA
GCAATTGTGA TTGCAGTTAT CTTAGGATAC ATACTTCCAG GAGGAATCGT TGCAAGAGGA
ACTGCATTAT TCTTTGGACT GTGCAGTGCT GCGTTTTTAC CGGCATATGC GTTAGGATTA
TTCTGGAAAA GAGCTACAAA AGAAGGTGCG ATTTCAGGGC TTTTGACAGG TACTTTTGTA
AGCTTGTTTT GCCTGCTATT TGTTCATCAA AAAGAAGCAG CAGCACTTGG AATTTCAAAA
ATGTTGATTG GTAGAGACGT TTTGATTTCC TCAATGCCTT GGCCATACGT GGATCCAATG
GTAATTTCAT TACCCCTTGC ATTTATTGCA ACAGTAGTTG TAAGTCTCTT AACAAAAGCA
CCTTCAGAAG AACACCTTAA AAAGTGCTTT AAAGGAATCT AA
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| Protein sequence | MDILLLNVIV LIYLLVIGYL GYKGWKGTSS AEDYMVGGRK IHPFVMAMSY GATFISTAAI
VGFGGFSGLF GMSLLWLTFL NIFLGIFIAF VFFGKRTRKM GHNLNALTFP ELLAKRFESK
FIQWFSGLLI FCAMPIYAAA VLIGAARFIE TTLSISFDVA LLVFSVIIAV YVVMGGLKGV
MYTDAFQGTI MFFGMLFLLY MTYDILGGVT TAHQAISNMS GLVPANLASM GHAGWTSMPT
FGSPMWWTIV SSIILGVGIG VLAQPQLIVR FMTVKSNREL NRAVLIGAVF ILIATGTAYV
VGTLSNVYFM NTEGILSIGA TVSDAFPTGN SDSIMPLYIN KAMPEWFIYI FLVSLLAAAM
STISSQFHAQ GTSIGRDVYE TLCGKKGLNS VIITRFGIIV AIVIAVILGY ILPGGIVARG
TALFFGLCSA AFLPAYALGL FWKRATKEGA ISGLLTGTFV SLFCLLFVHQ KEAAALGISK
MLIGRDVLIS SMPWPYVDPM VISLPLAFIA TVVVSLLTKA PSEEHLKKCF KGI
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