| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1694 |
|---|
| Symbol | |
|---|
| ID | 4928073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1649593 |
|---|
| End bp | 1650483 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640167210 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001098205 |
|---|
| Protein GI | 134046720 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCAA AAATTAGTTA CTTTCAAACG TTTTTATTTG CCGCAAAGAC TAAAAGCTTT
TCTAAAGCAG CAAAAAAATT GGGTGTTACA CAAGGAACTG TAAGCAACCA CATATCTGTT
TTAGAGAAAT TCTTCGATGC ACAGCTTTTT TTGAGAACTC CCGAAGGAGT TGATTTAACT
ACTGAAGGAA ATATTTTGTA CGAAAATGCA GAAAAATTAC TCGAAAATAT ATCTAACGCA
AAACAGCAGA TGAGAATTCT TCACGAACAT CCTGAAGGCG TAATTCGAAT TGCTGCAAGT
ACTACACCTG GGGAACATTT ACTCCCAAGC ATAATTAAAG ATTATACTAA GGTTTATCGA
GATGTATCAT TCCAGATTCA AATTACTGAT TCTGAAAAAT GTTTCAAGCT TTTAGAAGAC
AGGACAGTTG ACATAATCGC AGTTGGAAAT ATCTATGATG GATCATACGA AAGTGAAGTA
ATCGGAAAAG ATAGGCTTGT ACTCATAGTT CCGCCAGAAC ATCAACTCGC GAAAAAAGGA
GTTGCAAAAC TTTCAGATAT ATTAAAAGAA GATTATATTG ACAGAGAAGT TGGATCCGGT
ACAAGAGAGA TATTTGTAGA AGCTTTACAG GATAAAGGAT ATTCAATGAT GGATTTACAT
ACAATCATGA GCCTTGGAAG TAATTCTTCA ATCATTACGG CAGTTTCAGA AGGATACGGT
ATATCAATTA TTTCAGAAAT CCCTGCAAAA AAAGCGGCAG ATGCAGGACA GCTAATAATA
GTTCCTATTG AAGATTTAGA CCTCACTAGA TACATGTATC TTGTAAAAGG AAAGAAACCA
AGAAACCCAA GTGCAATAAA ATCATTCTGG GACTTTGTTT CAGGAAAATA A
|
|---|
| Protein sequence | MDPKISYFQT FLFAAKTKSF SKAAKKLGVT QGTVSNHISV LEKFFDAQLF LRTPEGVDLT
TEGNILYENA EKLLENISNA KQQMRILHEH PEGVIRIAAS TTPGEHLLPS IIKDYTKVYR
DVSFQIQITD SEKCFKLLED RTVDIIAVGN IYDGSYESEV IGKDRLVLIV PPEHQLAKKG
VAKLSDILKE DYIDREVGSG TREIFVEALQ DKGYSMMDLH TIMSLGSNSS IITAVSEGYG
ISIISEIPAK KAADAGQLII VPIEDLDLTR YMYLVKGKKP RNPSAIKSFW DFVSGK
|
|---|
| |