| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1680 |
|---|
| Symbol | |
|---|
| ID | 4929358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1625042 |
|---|
| End bp | 1625938 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640167190 |
|---|
| Product | protein of unknown function RIO1 |
|---|
| Protein accession | YP_001098191 |
|---|
| Protein GI | 134046706 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATA AAGACTGGAA ACTTTTAAAA ATAATTGAAA TTTCAATGAA AAATCACGAA
TGGGTACCTA TTCAGGACTT AAGACGAAAA ACAGGATTTC ATGAAAAAGA AATAGTTTTC
AGGCTCGGAA GATTGAATAA ATTTAAGTTT ACTAACAAGT CTAATTATGG ATACAGGCTT
TCTCACTGGG GATACGATGC TTTAGCGATG AATGCGTTTA TAAAAAAGGA ATTAATTGCA
GGAATTGGTG GAAAAGTTGG CGTTGGAAAG GAAGGCGACG TTTACCACGT AATGCTTACG
AATCACCGTG AAGCTGTTTT AAAATTCCAC CAACTTGGGA GAACCTGTTT TTCAATGGGG
AAAAGATACA GGGAATATCT TGCAAATAAA AGGCACATCA GCTGGCTTTA TGCTTCACGG
CTCACTGCTG CAAGAGAATT TGAAGTTTTA ACAATGCTTT TTCCAATTGT AAAAGTTCCT
GAACCAATTG AACAGAACAG GCACGCAATA ATAATGGGAA AACTTCATGG TGAAGAATTA
AAGCGTGTAA ATCTTATTAA AATAGATGTT GATCCCGAAG AATTCTTCTG GAAATTAATG
GCAGAAGTTA AAAAAACATA CGATTTAGGA ATTATTCACG GAGATTTAAG TGAATTTAAT
ATATTAATTG ATTCAGAAGG AGATTTTGTA CTTATTGACT GGCCTCAGGC GATTGAAGTT
GGAAAAAAAG GAAAATTGGA CAAATTGCCA TTTGAAGAAG TGGAATATGA TGAAGAATAC
TATTTAAAAA GAGATATTGA AAATTTGTTA AGGTATTTTA AAAAGTACGG AATCGACAAA
GACGTGGATA AATTATATAA TTATGTTCTT GGAGATATTA GTAGCGAAAA TGTATAA
|
|---|
| Protein sequence | MEDKDWKLLK IIEISMKNHE WVPIQDLRRK TGFHEKEIVF RLGRLNKFKF TNKSNYGYRL
SHWGYDALAM NAFIKKELIA GIGGKVGVGK EGDVYHVMLT NHREAVLKFH QLGRTCFSMG
KRYREYLANK RHISWLYASR LTAAREFEVL TMLFPIVKVP EPIEQNRHAI IMGKLHGEEL
KRVNLIKIDV DPEEFFWKLM AEVKKTYDLG IIHGDLSEFN ILIDSEGDFV LIDWPQAIEV
GKKGKLDKLP FEEVEYDEEY YLKRDIENLL RYFKKYGIDK DVDKLYNYVL GDISSENV
|
|---|
| |