| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1676 |
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| Symbol | |
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| ID | 4929338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1619216 |
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| End bp | 1620967 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640167186 |
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| Product | DNA polymerase II small subunit |
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| Protein accession | YP_001098187 |
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| Protein GI | 134046702 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACG ACTTTTTAAA CATCCAGGTA CTTTTAGCCC AGGATTCCTA CTCAAGAATC
CAAAATCTTG ATACTGAAGA TTTTTCAGAT TTATTCAATA AGATAAAAGA ATTTAAAAGT
AAAAAGGACG ATTTTATACT CCTTGATTCA CATTTTTTAA ACATTTTTTT GGGAAATAAT
TTAAAAAATA TTTTTGAAGA CTACGGAAAA TTCGATTTTT TAGCATACTA CACATCAAAC
GAAGTGGCGT CAGAAAATCA GAAAATTGTG GAACACGATG ATTTTGAGCC TGTTGAACCG
GAAGTTCCTA TCGAAAAAGA AATTAAAAAA GAAACTAAAG TTTATGATCT CGATTTGGAA
GACGTTGGGG AAGAAGAGCC CGAGCTCGAT GAAATACATA AAAAATTGGA AGAAGAGCGA
AAAGAAAGGC TTTTAGAAAT AAGGTCTATT CGAGAAAGTG TTAATAACAA AATAAACTAC
TACGCAAAAG ATATCGAAGC ACAAATACAC GTTTACGACG AATACGACGT TACTGGAAAA
TCAACGTGTG AGGGTACACT CGACGACTTT GTAAAATATT TTAAGGATAG ATGCAGTACT
TTAAGAAAAA TAATCGAATT AAAGGTTCAA AAGAAAGCGT ATCCCTTAAA CCAGCTTTTC
AGAAGAAAAA AAGAAAATGA AGTTTTCATT GCAGGGATTG TGTCAGACGC GAATACCACT
AAAAACGGAC ACAAAATGAT TGAATTGGAG GACGAAAACG GAACTTTCAG GCTACTTTTG
ATGAAAGACA AAATGGATAA AGGAGATCTT CCATCAGACG TTCTTTTAGA TGAAGTCATA
GGTTTTGAAG GAACTATTAA CGATAAAGGA GACTTAATGT TTGTGGATAG GGCTTTTAGG
CCCGATATTA CCCCTAAGCC TACAAAAACA ACAGACGAAA AAATATACAC TGCATTTTTG
TCAGACGTTC ACGTTGGAAG CCACGAGTTT TCAAACAAAG TATTTGCAAA ATTTATTAAA
TTCCTAAACG GGGAAGTAAA TAGTGGTCTA GAAGAAAAAA TAGTAAGTAG ATTGAAATAT
ATTTCAATTG CAGGGGATCT GGTGGATGGT GTTGGAATTT ATCCTGGTCA GGAGTACGAT
CTCTATGATG TGGATATAAT TTCGCAGTAT GCAGAAGTTG CAGCTTATTT AGAACAGGTT
CCTGAGCACA TAAAATTCAT AATTTCTCCT GGAAACCACG ACGCGCTAAG ACCTGCGGAA
CCGCAGCCTA CATTTGATGA ATCGATAACA AGCCTGTTTC CAAAAGAGAA TGTAACTTTT
GTTGGAAATC CTGGTGTTGT AAACATGCAC GGCCTTGATT TATTATTGTA TCATGGCAGA
AGTTTTGATG ATATTATTGG ACAGGTTTCC GTAGCTCAAT ATACAAACCC TCCATCAATT
ATGAAAGAAC TTTTAAAAAG AAGGCATTTA TGTCCCACAT ACGGTGGACG GTGCCCAATA
GCTCCGGAAC ATATCGATTA TTTGGCAATA CATACAGAAC CAGATATTTT CCACACCGGA
CACATTCATA TCAACGGTTA TGGTAATTAT CATGGAGTCA GGATGATAAA CAGCGGTACG
TTCCAAGAAC AAACCGATTT CCAGAAAAGA ATGGGTATCA AGCCTACGCC GGGAATTGTC
CCGATACAGG ATTTGTCTAA AAAAGAAACT CACGTAATTG AGTGGAATCA GGGAAAAATC
GAAATAATTT AA
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| Protein sequence | MINDFLNIQV LLAQDSYSRI QNLDTEDFSD LFNKIKEFKS KKDDFILLDS HFLNIFLGNN
LKNIFEDYGK FDFLAYYTSN EVASENQKIV EHDDFEPVEP EVPIEKEIKK ETKVYDLDLE
DVGEEEPELD EIHKKLEEER KERLLEIRSI RESVNNKINY YAKDIEAQIH VYDEYDVTGK
STCEGTLDDF VKYFKDRCST LRKIIELKVQ KKAYPLNQLF RRKKENEVFI AGIVSDANTT
KNGHKMIELE DENGTFRLLL MKDKMDKGDL PSDVLLDEVI GFEGTINDKG DLMFVDRAFR
PDITPKPTKT TDEKIYTAFL SDVHVGSHEF SNKVFAKFIK FLNGEVNSGL EEKIVSRLKY
ISIAGDLVDG VGIYPGQEYD LYDVDIISQY AEVAAYLEQV PEHIKFIISP GNHDALRPAE
PQPTFDESIT SLFPKENVTF VGNPGVVNMH GLDLLLYHGR SFDDIIGQVS VAQYTNPPSI
MKELLKRRHL CPTYGGRCPI APEHIDYLAI HTEPDIFHTG HIHINGYGNY HGVRMINSGT
FQEQTDFQKR MGIKPTPGIV PIQDLSKKET HVIEWNQGKI EII
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